Sus scrofa (pig): 100517798
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Entry
100517798 CDS
T01009
Symbol
TRMT2B
Name
(RefSeq) tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X1
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssc03016
]
100517798 (TRMT2B)
Enzymes [BR:
ssc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
100517798 (TRMT2B)
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100517798 (TRMT2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_31
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_4
Methyltransf_12
Methyltransf_32
Methyltransf_11
PrmA
Ubie_methyltran
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
100517798
NCBI-ProteinID:
XP_020935264
Ensembl:
ENSSSCG00000012489
LinkDB
All DBs
Position
X:complement(82638456..82741659)
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AA seq
496 aa
AA seq
DB search
MHSLRCFLSRVGPFSKPGLFPWCATKSPAWSQLFLGSACKGNFTHVVAKKHQRGQQKSQK
KPRHCGPLDGSWQERLADVVTPLWRLSYEEQLKVKFEAQKKILQRLESYLQMLNGVSVTT
AAPRSEGLCCCLHPIIPSPVIDGYRNKSTFSVNRGPDGNPKTVGYYLGTWRDRNIVCVQS
NHLKNIPEKHNQVAQYYEIFLRQSPMEPCLLFHEGGHWRELIVRTNSQGHTMAIITFHPQ
ELRQEELCVQKETVKEFFTKGPGAVCDLTSLYFQESTMTRCSHQQSPYQLLFGEPHIFED
LLGLKIRISPDAFFQINTAGAEMLYRTVGELSGVNSDTILLDICCGTGVIGLSLAQYTSQ
VLGIELVEQAVEDARWTAAFNGITNCEFHTGRAEKILPQLLKSKEDGQFIVAVVNPARAG
LHYQVVQAIRNCRAIRTLVFVSCKPHGETTRNIIELCCPSNSAKKLLGEPFVLRQAVPVD
LFPHTPHCELVLLFTR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcctgagatgcttcctctccagggtgggtcccttctccaaaccgggactgttc
ccctggtgtgccacaaagtctccagcttggtcacagctatttctgggctcagcgtgtaag
ggaaacttcacccatgtggtagccaagaagcatcaaagaggacaacagaaaagtcagaag
aaaccaagacattgtgggccactagatggttcctggcaggaaaggctggctgatgttgtg
acaccactctggaggctgagctatgaagaacagctcaaggtgaaatttgaagctcagaag
aaaattttacagagattggaatcttaccttcaaatgctcaatggagtcagtgtgacaaca
gctgcacctagatctgaggggctgtgttgctgtctccatcctattataccttctcctgtc
attgatggctaccgaaataagtccaccttctctgtgaaccgaggtccagatggcaatcca
aagaccgtggggtactacctgggaacttggagagacaggaacattgtctgtgtacagtct
aaccatctgaaaaatatccccgagaaacacaatcaagtggcacagtactatgaaatattc
cttcggcagtccccaatggagccctgccttctattccatgaaggtgggcactggcgtgag
cttatagtccgcaccaatagccaagggcatacgatggctatcatcactttccatccccag
gaattaaggcaggaggagctctgtgttcagaaggagactgtaaaggagtttttcaccaaa
gggccaggagcggtctgtgacttgacatcactttacttccaggagagtaccatgacccgt
tgtagtcatcagcagtccccctaccagctcctgtttggggaacctcacatctttgaagat
ctcctgggcttgaagatccgcatctctccagatgcctttttccagattaacaccgctggt
gcagagatgctgtatcggaccgtgggggagctgagtggagtgaactctgacaccatcctc
cttgacatctgctgtgggactggtgtgattggcctctctctggctcagtatacctcccag
gtccttgggattgagttggtggaacaggcagtagaggatgccaggtggactgcagccttc
aatggcatcaccaactgtgaattccacactggtcgagcagagaagattttgccacagcta
ctaaaatcaaaggaagatgggcagttcattgttgctgtggtgaacccagcccgggcagga
ctgcattaccaggtggttcaagccattcgaaactgcagggcaatccgcacactagttttt
gtttcctgcaagccccatggtgaaaccacaaggaacatcattgagctgtgctgtccttca
aactctgctaagaagctccttggggagccttttgtcctgagacaagccgtacccgtggat
ctgttcccccacacccctcactgtgagctagtgctcctcttcactcgataa
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