Sus scrofa (pig): 100518786
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Entry
100518786 CDS
T01009
Symbol
HDAC10
Name
(RefSeq) histone deacetylase 10 isoform X2
KO
K18671
histone deacetylase 10 [EC:
3.5.1.98
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04613
Neutrophil extracellular trap formation
ssc05034
Alcoholism
ssc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100518786 (HDAC10)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100518786 (HDAC10)
09165 Substance dependence
05034 Alcoholism
100518786 (HDAC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100518786 (HDAC10)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100518786 (HDAC10)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100518786 (HDAC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100518786
NCBI-ProteinID:
XP_003126824
Ensembl:
ENSSSCG00000000971
UniProt:
A0A4X1UPS6
I3LKB5
LinkDB
All DBs
Position
5:439142..445337
Genome browser
AA seq
671 aa
AA seq
DB search
MGTALVYHEDMTAARLLWDDPECEIERPERLTTALERLRQRGLEQRCLRLVAREASEAEL
GLVHSPEYVALLRGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAG
VVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQ
YIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMA
AFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAV
LEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQAPHWMSLRQQ
GVAPVLSSSTRSPGQGPSPPMPAGPEFKTAAAQAVAALSSLLDQLRLRPTPPVRTALALP
APLDGDLVLPHDVLCQEGSAPQEETQAWARPHEALAQDKALSALGRVLHLLDRILDGQVS
SGIAATPGPAVAATLDVAIRCGLSHGAQRLLCVAVGQLDRPPHLTDDGGTLWLNVGGKEA
AALSMFHVSVPLPRTTGGFLSCVLALVLPLAYSFQPDLVLVVLGPAHGLQDPQAALLAAL
LRGPAGGRVLALVDEESTPQLAVVLARVLHGEAPPSLGPFCMASLETMQALMHLRGQLEP
QWKMLRVAAPP
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcactggtgtaccacgaggacatgacggctgcgcggctgctgtgggacgac
cccgagtgcgagatcgagcgtcctgagcgtctgaccacagctctggagcgcctgcggcag
cgcggcctggagcagaggtgcctgcggctggtagcccgagaggcctcggaggcggagctg
ggcctggtgcacagccccgagtacgtggccctgttgcggggaacccaggccttgagcact
gaggagctccaggccctatccagacagttcgacgccgtctacttccatccgagtaccttc
cactgtgcccggttggccgcaggggctgctctgcagctggtggatgcagtgatggcggga
gttgtgcgcaacggtctcgccctggtgaggccgcctgggcaccacagccagagggccgcc
gccaatggattctgcgtgttcaatagtgtggccatagcagccaagcatgcccagcagaaa
catggactgcacaggatcctcatcgttgactgggacatccaccatggtcagggcacccag
tatatctttgaggatgaccccagcgtcctttacttctcctggcaccgctatgagcacggg
cgcttctggccctacctgcgagagtctgatgcagacaccgtcggccgcgggcggggcctt
ggcttcacggtcaacctgccctggaaccaggtcgggatgggaaacgcagattacatggcc
gccttcctgcaggtgctgctgcccttggcctttgagttcaacgccgagctggtcctggtc
tccgcagggtttgactccgcaatcggggattctgaggggcagatgcaggccacgcccgag
tgcttcgcccacctcacgcagctgctgcaggtgctggctggtggccgggtctgcgctgtg
ctggagggtggctaccacctggagtccctctcccagtccgtgtgcatgatggtacaagcg
ctgctcggcgaccccgccccgccgctctcagggcccatggtgccgcatggcagcgccctg
cagtccatccagagtgtccgggcagcgcaggcccctcactggatgagcctccggcagcaa
ggtgtggcccctgtactgagttccagcactcgctccccggggcaggggccctcccctcca
atgcctgcggggcctgagttcaagacagcagcagcccaggccgtggctgcactcagctcc
ctcctggaccagctacgcctccgtcccacaccccctgtccgcactgctcttgccttgcct
gcgccactggacggtgacctggtcctgccccatgacgtcctctgtcaggaggggtcagcc
ccacaggaggagacgcaggcctgggccaggccacacgaggccctggcccaggataaggcc
ctctctgcacttgggagggtcctgcacctcttggacaggatcctggatgggcaggtgagc
agcggcattgcagccaccccaggccctgctgtagctgccaccctggacgtggccattcgg
tgtggcctctcccacggagcccagaggctgctttgtgtggctgtgggacagctggatcgg
cccccccatctcaccgatgacggggggactctatggctgaacgtcgggggcaaagaggca
gctgccctgtccatgttccacgtctctgtgccactgccaaggacaaccggtgggttcctg
agctgtgtcctggccctggtgctgcccctggcctacagcttccagcctgacctggtgctg
gtggtactggggcctgctcatggcctgcaggacccccaagctgcactcctggctgcactg
cttcggggcccagcagggggccgagtcttggcccttgtggatgaggagtccacaccccag
cttgcggtggtcctggccagggtgctgcatggagaggcaccccccagcctgggccccttc
tgcatggcctccctagagaccatgcaagccctgatgcacttgagggggcagctggagcca
cagtggaagatgctgcgagtggccgctcctccttga
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