Sus scrofa (pig): 100620538
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Entry
100620538 CDS
T01009
Symbol
PRDM7
Name
(RefSeq) probable histone-lysine N-methyltransferase PRDM7
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00310
Lysine degradation
ssc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100620538 (PRDM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100620538 (PRDM7)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100620538 (PRDM7)
Enzymes [BR:
ssc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100620538 (PRDM7)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100620538 (PRDM7)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
100620538 (PRDM7)
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100620538 (PRDM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
SSXRD
zf-C2H2_5
zf-C2H2_jaz
SET
zf-C2H2_6
KRAB
zf_PR_Knuckle
Zn-ribbon_8
Motif
Other DBs
NCBI-GeneID:
100620538
NCBI-ProteinID:
XP_020951432
LinkDB
All DBs
Position
6:64464..78212
Genome browser
AA seq
798 aa
AA seq
DB search
MRPDRRPEESPDPAAGSTERKAAVRVGPQGRLQAGRSEATDAFKDISIYFSKEEWTEMGE
WEKIRYRNVKRNYEALTTIGLRAPRPAFMCHRRQAIKPQVDDTEDSDEEWTPRQQVKPCR
VAFRVEHNKHQKVMSRVPLSNKSSLKELLTTAEVPETSGSEQAQEPVSPPGEASTSRRRS
GQELARRRKDTEARMYSLRERKGHAYQEVGEPQDDDYLYCEKCQNFFIDSCAAHGPPTFV
KDSAVDKGHPNRSALTLPPGLRIRPSGIPEAGLGVWNEAHDLPLGLHFGPYEGQVTEDEE
AANSGYSWLITKGRNCYEYVDGKDKSWANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCR
VVRPGCELLVWYGDEYGQELGIKWGSKWKKELTAGITAGPAEPKPKIHPCPSCSLAFSSQ
RFLSQHVERSHPSQSLPRASARRGLQPEGPCPDNQQQQQPYPDPHSWDGTSESQDVKEGS
KPFLERRRLRKTSRASSYAPEGQMRSSRVRERMTEEEPSAGQKVNPEDTGTLFTVAGESG
ILRVENRGYGPDSGLTRHPRTHTGEKPHVCSECGRGFSVKSHLIRHQRTHTGEKPYVCRE
CGRGFSVKSHLIRHQRTHTGEKPYVCRECGRGFSVKSSLITHQRTHTGEKPYVCRECGRG
FSVKSHLIRHQRTHTGEKPYVCRECGRGFSEKSSLVTHQRTHTGEKPFVCRECGRGFSVK
SSLVTHQRTHTGEKPYVCRECGRGFSVKSNFITHQRTHTGEKPYVCRECGRGFSEKSSLV
THQRTHTGEKPYVCREGE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgacaggcgcccggaggagagccctgacccagccgctgggagcaccgagcgg
aaggcggcggtgagagtggggccgcagggccggctccaagccgggcgatcggaggccaca
gatgctttcaaagacatttccatatacttctccaaggaagaatggacagagatgggagag
tgggaaaaaatccgatacaggaatgtgaaaaggaactatgaagcgctgaccactataggt
ctcagagcccctcggccagctttcatgtgtcaccgcaggcaagccatcaaaccccaggtg
gatgacaccgaggattctgacgaagaatggacaccaaggcagcaagttaaaccttgtcgc
gtggccttcagagtggagcacaataaacaccagaaggtgatgtccagggtgccattaagt
aacaaatctagtttgaaggaactgttgacaacagcggaggtgccagagacaagtggctca
gagcaggcccaggaacctgtgtcccctcctggagaagcaagtacctctagacggcgctct
ggacaagaactggcccgcagaaggaaggacacggaagcccggatgtacagcctgcgagaa
agaaagggccacgcctaccaggaagtcggggagccccaggacgacgactacctctattgt
gagaagtgtcagaacttcttcattgacagctgtgccgctcacgggcccccgacctttgtc
aaggacagtgcagtggacaaggggcatcccaaccgctcagccctcactctgccccctggg
ttaagaatcagaccgtcaggcatccctgaggctggccttggagtgtggaacgaggcccac
gatctgccgctgggcctgcactttggcccctacgagggccaagtcacagaggatgaagag
gcggccaacagtggatactcctggctgatcaccaaagggagaaactgctacgagtatgtg
gacggaaaggacaaatcctgggccaactggatgcggtatgtgaactgcgcgcgggacgac
gaggagcagaacctggtggcctttcagtatcacaggcagatcttctaccgaacctgccgg
gtggtcaggccgggctgtgaactgctcgtctggtacggggacgagtacggccaggagctg
ggcatcaagtggggcagcaagtggaagaaagagctcacagcagggatcacggcagggcca
gcagaaccaaagccaaagatccatccatgtccctcctgctctctggccttctccagccag
agattcctcagccaacatgtggaacgcagccacccctctcagagcctcccaagagcatct
gcaagaagaggcctccaaccagagggtccctgcccagacaatcaacagcagcagcagcca
tatcctgatccacacagctgggatggcacatctgaaagtcaggacgtcaaggaagggtcc
aaacctttcctggaaaggagaaggctgaggaagacttcaagggcctcttcctacgcaccc
gaagggcaaatgaggagttctagggtacgtgagagaatgacggaggaagagcccagcgca
ggccagaaagtgaacccagaggacacaggcacactattcacggtggcaggagagtcagga
attctaagggtcgagaacagagggtatgggccagactcgggtctcaccagacacccgagg
acacacacaggggagaagccccatgtctgcagcgagtgtgggcgaggcttcagtgtgaag
tcacatctcatcagacaccagaggacacacacgggggagaagccctatgtctgcagggag
tgtgggcgaggcttcagtgtgaagtcacatctcatcagacaccagaggacacacacgggg
gagaagccctatgtctgcagggagtgtgggcgaggtttcagtgtgaagtcaagtctcatc
acacaccagaggacacacacgggggagaagccctatgtctgcagggagtgtgggcgaggc
ttcagtgtgaagtcacatctcatcagacaccagaggacacacacgggggagaagccctat
gtctgcagggagtgtgggcgaggcttcagtgagaagtcaagtctcgtcacacaccagagg
acacacacaggggagaagccctttgtctgcagggagtgtgggcgaggcttcagtgtgaag
tcaagtctcgtcacacaccagaggacacacacgggggagaagccctatgtctgcagggag
tgtgggcgaggcttcagtgtgaagtcaaatttcatcacacaccagaggacacacacgggg
gagaagccctatgtctgcagggagtgtgggcgaggcttcagtgagaagtcaagtctcgtc
acacaccagaggacacacacaggggagaagccctatgtctgcagggaaggtgagtga
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integrated database retrieval system
