Syngnathus scovelli (Gulf pipefish): 125967271
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Entry
125967271 CDS
T08785
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125967271
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125967271
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
125967271
Peptidases and inhibitors [BR:
sscv01002
]
Metallo peptidases
Family M10
125967271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_4
Reprolysin_3
Peptidase_M66
DUF4953
Motif
Other DBs
NCBI-GeneID:
125967271
NCBI-ProteinID:
XP_049574162
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MGLVSVFVSVFLLHFIHFKSTSAAPSPIIKFPGDDTPITDKEVALRYLNTFYGCPEDRCN
LMVLKDTLKKMQKFFSLQETGEIDAKTVEIMKKPRCGVPDVANYNFFHRKPLWQKKDITY
RILGYTPDLDEEVINDAFFRAFKVWSDVTPLSFSRLMDGEADIMINFGRNEHGDGYPFDG
KDGLLAHAFAPGPGIGGDSHFDDDEQWTLGDGQVVKVKFGNADGEFCKFPFLFQGTEYTS
CTSQGRDDGFLWCSTTYNFDDDGKYGFCPHELLFTLGGNAEGAACKFPFTFQGDKYDSCT
TTGRDDGYRWCATTENYDQDKTYGFCPETAMSTVGGNSEGAPCVFPFTFLGDTYDSCTTS
GRSDGKKWCGTTKSYDDDRKWGFCPAEGYSLFLVAAHEFGHALGLEHSDDTNALMAPIYT
YTKDFRLSSDDIKGIQELYGIPTDKPLPPTQEPVTPMDICKEPITFDAVAQIRGETFFFK
DRFLFRSVSFRNKPKGPMLVATSWPDLPSKIDAVYENPVEEKTVFFSGNQLWVYKEHELE
RGYPKRLDSLGLPADLEQIDAAFSFTKNKKTYLFAGEQFWRYDEKTKTMDSGFPKLIAEA
WNGIPDGVDAAFSLSGIDYSYFFKGNHYFKLEDSSLKIVKLGEVTKDWLGC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggtttagtgtcagtttttgtgagtgtgtttttgctccatttcatccactttaaatca
acatctgctgccccttctcctatcatcaaatttcctggagatgacactcccataacagac
aaagaagttgctctgcgctacctgaacacattctatgggtgcccggaagaccgatgcaac
ctgatggtgcttaaggacaccttgaaaaaaatgcaaaagttcttctccttgcaagagact
ggcgagattgacgccaagactgttgagatcatgaagaagccccgctgcggtgtgccagat
gtggccaactataacttcttccacagaaaaccactgtggcagaagaaagacatcacatat
agaatccttggctacactccggatctagacgaggaagtcatcaatgatgctttcttcaga
gccttcaaagtgtggagtgatgttacaccgctgtcattcagtcgcctcatggacggagag
gctgacattatgatcaattttggccgcaatgagcatggcgatggttacccatttgatggc
aaagacggcctcttggcgcacgccttcgcacccggcccaggaataggcggcgactcccac
tttgacgacgacgagcagtggacgctcggagatggccaagtggtaaaagtgaagttcggg
aatgcggacggagagttctgcaaattccccttcctgttccaggggaccgagtacaccagc
tgcacatctcaaggccgtgacgacggattcttgtggtgctctaccacttacaactttgac
gacgatggcaaatatggcttctgtcctcacgaattgctcttcaccctgggtggaaatgcc
gaaggcgctgcgtgtaaatttcccttcaccttccagggcgacaagtatgacagctgcacc
accacaggaagagatgacggctatcgctggtgtgccacaaccgagaactacgaccaggac
aaaacctacggcttctgccccgaaaccgccatgtcaaccgtgggaggcaacagtgaaggg
gccccctgtgtcttccccttcaccttcctgggagacacctatgactcctgcaccacgtcc
gggcgcagtgatggcaagaagtggtgcggtacgaccaagagttacgatgatgaccgcaag
tggggtttctgtccagccgaaggttacagtttattcctggtggctgctcatgaatttggc
catgcccttggtttggagcactctgatgacactaatgcactgatggcccccatttacacc
tacacaaaagacttcagactctctagcgatgatatcaagggcatccaggagctatatggc
attcctactgacaagcctctaccaccaacccaggaacccgttacccccatggacatctgt
aaggagcccattacttttgatgctgttgcccaaattagaggagagactttcttctttaaa
gacaggttcctgttcaggtcagtaagcttcagaaacaagcccaaaggacccatgctggtg
gccacctcctggcctgacttgcccagcaagatagacgccgtctatgaaaacccagtggag
gagaaaacagtcttcttttcaggcaatcaattgtgggtgtacaaggagcacgaattggag
agaggctaccccaagagactcgacagtctcggcctgccagccgacctggaacagattgat
gccgctttcagctttacgaagaacaagaagacttacctctttgctggggagcaattctgg
agatatgatgaaaaaacaaagacgatggacagcggtttccccaaacttattgctgaagct
tggaatggcatcccagatggcgttgatgctgccttcagtctcagcggaattgattacagc
tacttcttcaaaggcaaccactatttcaaactggaggacagcagcttgaagatcgtcaag
ttgggcgaagtcacaaaggactggctcggctgttga
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