Syngnathus scovelli (Gulf pipefish): 125971799
Help
Entry
125971799 CDS
T08785
Name
(RefSeq) probable asparagine--tRNA ligase, mitochondrial
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125971799
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sscv01007
]
125971799
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125971799
Enzymes [BR:
sscv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
125971799
Amino acid related enzymes [BR:
sscv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
125971799
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125971799
Prokaryotic type
125971799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2b
DUF4426
Motif
Other DBs
NCBI-GeneID:
125971799
NCBI-ProteinID:
XP_049580748
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MFRTAAQTCYVASASRRVLLKTLRHFCKKAPRKLRVAEAISGTDLEANVQVQGWVRSVRS
QKANLFLDVNDGSCLQSLQIVGSPELNHPLVTFGSAVEVRGILKKSLHPKQPVELQAEHI
DLVGQCNPLDFPFKIKERHKLEYIRQFPHLRARTNAFGSLLRIRGEATSAVHSYFKENGF
VHIHTPIITSNDCEGAGELFQIEHSWPQNSKDENFFSVPAYLTVSGQLHLEVMAGSFSRV
YTFGPTFRAENSQSRRHLAEFYMVEAEVAFTRSLEDLMEVMEDMFKWTTEHVLERCVQDV
DLFHKHVTPGHRDAVEAMLKEKFHVMTYSEAIEILKRSSQTFAFPTNWGCDLHTEHEKYL
VKHCGTRPLFVTDYPYQLKPFYTRDNRDHPQHTAAAVDLLVPGVGELCGGSLREERLDLL
RARLEEVGLEDTYDWYLDLRRFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPRFSHSC
LL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggactgccgcacaaacgtgttatgttgcttccgcctctcgtagagttttgcta
aaaactctgagacatttctgcaaaaaggcgcctaggaagcttcgagtcgctgaagcaatt
tcaggcactgacttggaagcaaacgtccaagtgcagggatgggttcgctccgttagatcg
cagaaggcaaatttattcctggatgtcaacgacggcagctgtctgcagtcgttgcagatc
gtcggcagtcctgagctgaaccatcccctggtcacattcgggagcgccgttgaggttcga
gggatcctgaagaaaagtctgcaccccaaacagcccgtggagctacaagcggagcacatc
gacctggttggacaatgtaaccctttggatttcccgtttaaaatcaaagagcgccacaag
cttgagtacatccgccagttccctcacctccgcgccagaacaaacgccttcggctccctg
ctgaggatacgcggcgaggccacttcggccgttcactcctatttcaaggaaaatggcttt
gtgcacattcacacgccgatcatcacctccaacgactgcgagggggccggcgagctcttt
cagatcgagcattcctggccgcagaacagcaaggatgagaatttcttctcggttccggcc
tacttgaccgtgtctgggcagctccatttggaggtcatggcagggtcattttccagagtc
tacacattcgggccgacgtttcgcgccgagaactcccagagccgacgccatctggcggag
ttttacatggtagaggcggaggtggcctttacgcgctccctcgaggacctcatggaggtc
atggaggacatgttcaaatggaccaccgagcacgtgttggagcgctgcgttcaagacgtg
gacttgttccataagcatgtgacaccgggacacagggatgccgtggaggccatgctgaag
gagaaattccacgtgatgacctacagtgaggcaatagaaatccttaagcgaagctcgcag
acgttcgccttccccacaaactggggctgcgaccttcacacggagcacgagaagtatctg
gtgaaacactgtggcacgcgtccgctctttgtcaccgattatccgtaccagctcaagccg
ttctacaccagagacaaccgggaccatccccagcacacggcggctgctgtggaccttctg
gtgcccggcgttggggagttgtgcggaggctcgctaagagaggagaggctagacctgctg
agggctcgcctagaagaggtcggattagaggacacctatgactggtatttggatttgagg
cgttttggctccgtccctcatggtggcttcggaatggggttcgagcgatatctgcaatgc
attctgggagtagacaacatcaaagatgtgattcctttccccagattttcacattcttgt
ctgctgtag
DBGET
integrated database retrieval system
