Syngnathus scovelli (Gulf pipefish): 125977160
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Entry
125977160 CDS
T08785
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2a isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04260
Cardiac muscle contraction
sscv04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125977160
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
125977160
04261 Adrenergic signaling in cardiomyocytes
125977160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125977160
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125977160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Exonuc_VII_L
DASH_Spc19
Cache_3-Cache_2
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
125977160
NCBI-ProteinID:
XP_049589393
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MGKMAIGAPSYGALCLLCIQTVLLVCVSTPTAGTHHFPQHYTMIHWAARIEKELEKVLQH
VTGTQQLRSIYNEKRSQFEIKRNNPKDLVERVARDIARLLNSKRKALEKLANEAEQLQKD
HKWQDGVTENAISYYDSKADSDYTEDGEEENPLESSTSLELEFVDDPNFKNKVNYSSSAV
QIPTDIYKGSPVILNELNWTQALERVFIENRRDDSSLRWQVFGSATGVTRYYPATPWRAP
NKIDLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVIKMLDTLSDDDYVN
VARFNDEADAVVPCFRTLVQANVRNKKIFKEAVMHMQAKGTTDYKSGFTFAFEQLLNESS
APRANCNKMIMMFTDGGEDRAQEIFEKYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANK
GYYFEIPSIGAIRINTQEYLDVLGRPMVLAGSKAKQVQWTNVYQDALGLGLVITGTMPVF
NLTADNSSAQNQLILGVMGVDIAINEIKKKTPTYRLGANGYTFATDPNGYVLLHPNLRPK
IINFREPVTLDFLDAELEDTNKEEIRRQMIDGKSGQRKIKTLIKSVDERYIDGAVRTYTW
TPVEGTDYSLGLVLPTYSENHIKANLSDQILQVQLSYIQDFESLLPNSFESEGHIFIAPR
EYCNDLELSSNNTEFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVDKVWKNKD
LNTYGFLAVFAATDGGITRVFPNKAAESWEEDPEPFNASYYRRSLDNKGYIFRAPYRTAR
DELLNPENDTIGILVSSAVDITVGGKTIKPAVVGVKLDLEAWVDKFKILASNHTDNRQGP
NTCGPNRVCEMDCEANNDDLLCYLIDDGGFLIMSNQKDDWNKVGMFFSDVDSTLMYALYN
NSFYYRKQSFDYQSVCERMPNSEAGAARRGVFVPTIADFVNLAWWTSAAAWSLFQQIMYG
LAYHSWFVTDEVGAEGLDSRDRSCVMIQTQYYLSNLSSSFNMLQDCGNCSRLIHAKRLNN
TNLLFVVAEKMPCNGCEIEKLSQEEVEFMEENPCEEMTVARYRKGPSTCFDYNNTENTSD
CGRGHSLRPSRVALLLIQLFLLYPVISPHADSLLH
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaatggcgatcggagccccgtcgtacggcgcgctctgcctcctgtgcattcaa
actgtacttctcgtgtgcgtgtccacgccgaccgccgggacacaccacttcccgcagcac
tacacaatgattcactgggcggctcgcatcgagaaagagctggaaaaagttctgcagcac
gtcaccgggacgcagcagttgagatcgatttacaatgagaagaggagccagtttgaaatt
aagaggaacaaccccaaggacctcgtggagagagtggcacgggacattgccaggctgcta
aacagtaagaggaaagccctggagaaactggccaacgaggcagagcagcttcagaaggat
cacaagtggcaagacggagtgacggagaatgccatttcatactacgattccaaagcggat
tcagactatacggaggacggagaagaggaaaatccactggagagctcgacttctctggag
ctggaatttgtggacgatcccaatttcaaaaacaaggtcaactactcatccagcgccgtg
cagattccgaccgacatctacaaaggctctccggtgatcctaaacgagttgaactggacg
caggcgctggagcgtgttttcatcgagaaccgtcgagatgacagctccctccgctggcag
gtgtttggcagtgccacgggcgtgacacgctactatccagccacgccatggagagctccc
aacaagattgacctctacgacgtgcgccgcaggccatggtacattcaaggcgcatcctct
ccaaaggacatggtcatcatagtggatgtgagtgggagtgtcagtggtctcactctcaag
ctgatgaagacctccgtcatcaagatgctggatacactctcggacgatgactacgtgaac
gtagccagatttaatgatgaggccgacgctgtggtgccctgctttaggactttggtccaa
gccaacgtgcgcaacaagaaaatcttcaaggaagccgtcatgcacatgcaagccaaagga
accactgactataagtctggcttcacgtttgcctttgagcagcttctcaacgagagcagc
gctccgagggccaactgcaacaagatgatcatgatgtttacagacggcggcgaggatcga
gcacaggaaatcttcgagaagtacaactggcccaacaaaacggtgcgtgtgttcactttc
tctgtgggtcagcataattatgacgtcaccccactgcagtggatcgcttgtgccaacaaa
ggttactactttgaaatcccatcgatcggagccatccgaatcaacacccaggagtacctg
gatgtcctggggcgacccatggtgctggccgggtctaaagccaagcaggtccagtggacc
aatgtctaccaggatgctttgggtttgggtctggtaatcacagggaccatgccggtcttc
aacctcactgcagataactcaagcgcgcagaaccagctcatcctcggagtcatgggtgtg
gacatcgcaatcaacgagatcaaaaagaagacacccacgtatagacttggggccaatggt
tacacttttgcgactgatcccaacggttatgtgctgctacatcccaacctgagaccgaag
atcatcaacttcagggagcccgtcactctggactttctcgacgcggaattagaggacacc
aacaaggaggagatccggagacaaatgattgatggcaaatccgggcagaggaaaatcaag
acgctcattaagtcggttgatgagaggtacattgacggggccgtgcgtacgtacacgtgg
acaccggtggagggcacggactacagtctagggttggtgctgccaacatatagcgagaac
cacatcaaagccaaccttagtgaccaaatcctgcaggtgcagttgtcatacatccaggat
tttgagtcactgctgccaaacagttttgagtctgaaggacatatattcattgctcccagg
gaatactgcaacgatctggagttgtcaagcaataacacggaattcctgctcaacttcatc
gcccttatggagaaagtgacgcccgactccaagcaatgcgacaatttgctgcttcacaac
ctgattctggacacgggcataatcaggcagctggtggacaaagtgtggaagaataaagac
ttgaacacgtacggttttctggctgtattcgctgccacagacgggggaatcacacgagtg
tttcccaacaaggctgcggaaagctgggaggaagaccccgagccgtttaacgccagctat
taccgccgcagtctcgacaacaagggctacattttcagagcgccttatcgtacagcccga
gacgagctgctcaacccggagaatgacaccattgggatcctggtcagctcggcggtggac
atcaccgtcggggggaagactatcaaaccggcggttgtcggagtgaaactggatctcgaa
gcttgggtggataagttcaagattcttgccagtaaccacacagacaaccgccaaggccct
aacacgtgtgggccaaacagggtctgcgagatggactgtgaagccaacaatgacgacctc
ctgtgttacctaatcgacgatggtggcttcctcatcatgtccaaccagaaggatgactgg
aataaggtgggcatgttcttcagtgatgtggactcaaccctgatgtatgcgctctacaac
aactccttctactaccgcaagcagtcgtttgactaccagtcggtgtgcgagcgcatgccc
aacagtgaggccggagcagcacggagaggagtctttgtgcccacgattgcagattttgtc
aacctcgcttggtggacatctgcagccgcatggtccttgttccagcagatcatgtatggg
ctggcttatcacagctggtttgtcacagatgaggtaggcgctgaaggactggactccagg
gataggagttgtgtcatgatccagactcagtactacctgagcaacttgagcagctccttc
aacatgctgcaggactgtggcaactgctccaggctgatccatgccaagaggttaaacaac
accaacctgttgtttgtggtagccgagaagatgccctgcaatggctgcgagattgaaaag
ctgtcccaggaggaggtggagtttatggaggagaacccgtgtgaagaaatgacagtggcg
cgctataggaaaggaccctccacctgttttgactacaacaacacggagaacacgtcggac
tgtgggcggggccactccttgcgtccgtcccgcgtggctttgctgctgattcaacttttc
ctgctttatcctgttatcagtcctcacgctgactctctactacattaa
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