Syngnathus scovelli (Gulf pipefish): 125978407 Help Entry 125978407         CDS       T08785                                  Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sscv00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     125978407  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sscv03400]     125978407 DNA repair and recombination proteins [BR:sscv03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      125978407 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_II MutS_IV MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  125978407 NCBI-ProteinID:  XP_049591706 LinkDB All DBs Position Unknown AA seq 1373 aa AA seqDB search MAKQSSLLNFFSKSPPPVSKPKPSAHPTEADLPSSIDKSNSSPKEEAKLLSSKTTKTKSK SVVKNAKGGFSQLFGDKASTAKDASTTCSFNAGSLVWAKLEGHPWWPCMVVPQPLSGQQM RGRGRAQRIHVHFFDEPPTRGWVSTKYVREYHGSDSSDAKSGGMFFSGKPDIRHAMELAD KVLFDSPEKRLKMPLCTDPSDEEEEEEEMELDQTTMTDSEGSDEDQAKNEELKSSNVSLH PTRSNGNKAKRRRIIVASESEDSEDEFKPEQAASSSEDDEEEATVSSEVEEAGSTQESEA ESPVKPVKRKRPVEKPATTKPKITSIPSSASKRPRASTSGDTKSRLSAFSAPDIFESQAS GSGTDGSTMWDHEKLEWLQDHKRKDGQRRKVTDEGYDPTTLYVPEDFTNRNTPGMRQWWL IKAQMFDTVIFYKVGKFYELYHMDAVIGVNELGLTFMKGTWAHSGFPEIGFARFSDVLVQ KGYKVARVEQTETPEMMEARCKTLIKPTKFDRVVKREVCRIITRGTQTYSVLDGTPSESQ SKFLLSLKEKPEYEGKGWCSRTYGVCFVDTSVGLFHIGQFPDDRHCSRLRTLIAHFAPAE VLFEKGNPSVETRKILKASLSSALQEGLNASSQFWDAQTTLKKLSEEDYFRESAGKDQGT NFLPAVLKKMTSDSDSLGLTPKEGYELALSSLGACIFYLKKCLVDQELLSMANFEEYIPV DVEMEKAAGEKSFFARTRQRMVLDGVTLANLEIFQNGSGGTEGTLLERLDTCTSAFGKRL LKQWLCAPLCNPTSIEDRLDALEDLMACQGQVSEVSELLKKLPDLERLLSKVHSIGTPLK DQNHPDSRAVLYEEVTYSKRKIADFLSALEGFQTMQEIVNVFASVAGDFQSKLLCQVVSL QNDSGGLFPDLSAELKRWETAFDHQKARNTGVITPKEGFDPEYDQALLGIKSCDQKLQDY LDRQKKRIGCKKMAYWGTGRNRFQMEVPDSVSERNIPEEYQVKSTKKGWKRYVTTETEQL FYELQGFEEKRDAALKDCMRRLFYNFDKNYSNWKTAVECMAVLDVLLALLRYSQGGDGPM ARPQVVLPDGDEQITPFLELTGSRHPCVTKTFFGDDFIPNDICIGCPGGSEDGDDQNNHA PCVLVTGPNMGGKSTLMRQCGLVIVLAQLGCFIPAESLRFTPVDRVFTRLGASDRIMAGE STFFVELSETACILHHATKHSLVLLDELGRGTATYDGTAIACAVVKELAEKICCRTLFST HYHSLVEDYANNPAVRLGHMACMVENECEDPSQETITFLYKFISGPCPKSYGFNAARLAS LPETVIQSGHKKAREFEERIISLRLFRKLCQFAEDPTQDKTHFVTLVQKIQSM NT seq 4122 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagctcacttttaaatttcttctccaagtctcctccgccggtgtccaag ccgaagcccagtgctcacccgacagaggccgacttgccgtcctccatcgacaagtccaac tcttctccaaaagaagaagctaaactactctcgagcaagaccaccaaaaccaaatcaaag agtgtcgttaagaatgcgaaaggaggatttagccaactgttcggagataaagcgtcaaca gcaaaagacgcgagcaccacatgttcattcaatgcagggtcccttgtgtgggcaaagttg gaggggcacccatggtggccatgcatggtagtacctcaacctctgagcggccagcagatg cgaggccgtggtcgggcccagcgcatacatgtccacttttttgatgaaccgcccacacgg ggatgggtcagcaccaaatacgtcagagagtaccatggttccgacagtagtgatgctaaa tccggaggaatgttttttagtgggaagcctgatatccgccatgcgatggagcttgcagac aaagtcttgtttgatagcccagaaaaacgattaaagatgcctctctgcacagatccatca gatgaggaagaagaagaagaagaaatggagcttgatcaaaccacaatgactgacagcgag ggcagtgatgaggatcaagcgaaaaatgaggaattaaagtcatcaaatgtcagcctgcat ccaacccggtctaatggaaataaagccaagcgccgccgtataatcgtggcttcagaaagt gaggattctgaggatgaattcaaaccagagcaagccgctagcagcagtgaggatgatgag gaagaagccacggtaagcagtgaagttgaagaagcagggagcacacaagagtctgaagcg gaaagcccagttaagcctgtaaaacgtaaacgtcccgtggagaagcccgcgacgacaaag ccaaagataaccagtatcccttccagtgcatcgaaacgacctcgggcatctacatctggc gacacaaagtctcgtttatctgccttttctgcccctgacatctttgaaagccaggccagc ggatcaggcacagatggatccacaatgtgggaccacgagaagctggagtggttgcaggat cataagaggaaagatggtcagaggcggaaagtgactgacgaaggttatgatcctaccacc ctgtacgtgccagaagacttcaccaaccggaacactcccggtatgcgtcagtggtggctc atcaaagcccagatgtttgacactgttattttctataaggttggcaagttctacgaactc taccacatggatgctgtgatcggagtcaatgagctcggattgacgtttatgaaagggacc tgggctcactctggctttccagaaatcggctttgcacgcttctcagacgtactggtccag aagggctacaaagtggcacgtgtggagcagactgagaccccagagatgatggaagcgcga tgtaagactttgatcaaacccaccaagtttgaccgcgttgtgaagagagaagtgtgccgg atcataacgcgaggtacccagacgtacagcgtgttggacggcaccccttctgagagtcag agcaagttcctgctaagtttaaaggagaaacccgaatatgaagggaagggttggtgtagc cgcacttatggagtctgctttgtagacacctctgttggcctcttccatattggtcagttt ccagacgaccgccactgttcacgtctgcgcaccctgatagcgcactttgccccagccgaa gtgcttttcgaaaaggggaacccatcggttgaaacgcgcaagatactcaaggcttctctg tcgtcagcgctgcaggagggactgaatgcaagctcacagttctgggatgctcagacgact ctgaaaaagttgtcagaggaagactacttcagagagagtgcaggaaaggaccagggcaca aattttctacctgctgttcttaagaaaatgacctctgacagcgattcgctcggtcttacc cccaaggagggttacgaactggcgctctcatcgttgggtgcgtgcatcttctacttgaag aagtgtctcgtagaccaggagttgctctccatggccaactttgaagaatacatccctgtc gatgttgaaatggagaaagctgccggagagaaaagtttctttgctcggactcgtcagcgc atggtcctggacggagtgactctggcaaacctggagatatttcaaaatggctccggaggt acagagggaacgctgcttgagcgcctcgacacctgcaccagtgcttttggaaagcggctg ctcaagcagtggctctgcgctcctctatgtaacccaacatccatcgaggacagactagat gcactagaggacctcatggcttgtcaagggcaagtgtccgaagtttcggagctgctgaag aagctccccgatttggagcgcctcctgagtaaagttcacagcattggcacaccgctgaag gatcagaaccacccggacagcagagcggttctctacgaggaggtcacctacagcaagaga aaaatagcagactttctttcagcgcttgaaggtttccaaaccatgcaagaaatcgtcaat gtctttgcatcggttgctggtgactttcagtccaagttactctgtcaagtggtaagtctt caaaatgacagcggcgggctctttcctgacctctccgccgaactcaagcgctgggagacg gcctttgaccaccaaaaagcacggaacacgggtgtcattaccccgaaggagggcttcgac cccgaatatgaccaggctctgctcggcatcaagagttgcgatcaaaaactacaggattat ctggaccgacagaaaaagcgaatcggttgcaaaaagatggcgtactggggcaccgggaga aatcgctttcagatggaggtgcccgacagcgtctctgaaaggaatattccagaagagtac caggtgaagtcgacaaagaaaggctggaagcggtacgtgaccacggagactgagcagctg ttttacgagttgcaaggatttgaggagaagcgagatgctgccctgaaagactgcatgagg aggctcttctacaactttgacaagaactacagcaactggaagactgcagtggagtgcatg gcagtgcttgatgttctgttggccttattacgctacagccagggcggagatggaccaatg gctaggccacaagttgttctcccagatggcgatgagcaaatcacacccttcctcgaactc accggttcccgtcacccgtgtgttaccaagacattttttggcgacgacttcatcccaaat gacatctgtatcggctgccccggaggcagcgaggatggcgatgatcaaaataatcatgcc ccatgtgtcctcgtcacaggacccaatatgggcggaaagtccactctcatgagacagtgt ggacttgtgatcgtgctcgctcagctgggctgcttcatacctgccgagagtctgcgcttc acgccagtcgatcgagtcttcactaggctcggcgcttccgatcgcatcatggctggagag agcacctttttcgttgagttgagcgagactgcgtgtattctgcaccatgccactaaacac tcccttgtgcttctggatgaattaggaaggggcacggccacgtatgacggcacggctatc gcctgcgcagttgtgaaggaacttgctgaaaagatctgctgtcgcaccctcttctctaca cattaccactccctagtggaggactatgccaacaacccggcggtgcgccttggccacatg gcgtgcatggtggaaaacgaatgcgaggatccaagccaagagaccatcacgttcctctac aagttcatttctgggccgtgtcccaagagctatggcttcaacgctgctcgacttgccagc ctaccagaaactgtcattcagtcagggcacaaaaaggccagagagtttgaggagaggatc atcagtcttagacttttcaggaagctctgccagtttgctgaagaccccacacaggataag acccactttgtcacacttgttcagaagattcaatccatgtaa

DBGET integrated database retrieval system