Syngnathus scovelli (Gulf pipefish): 125984718
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Entry
125984718 CDS
T08785
Name
(RefSeq) paired box protein Pax-3a isoform X1
KO
K09381
paired box protein 3/7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125984718
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125984718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
125984718
NCBI-ProteinID:
XP_049602779
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MTALAGGLTRMMKPGPHQNYARGGCSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGVRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQSASPELDKKIEE
YKRENPGMFSWEIRDKLLKDGICDRNSVPSVSAISRVMRSKFGSLGDDDEEDGDEVVKRE
MEENESRTKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAF
ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPLA
MSDLQPYQLPESPYPATSIAQASEQPSMVHRPQPLPPTSVHQSGLSSSSSAQDAGSAYCL
SSGRHGFSGYSDSFVAPTGHANAVNPAAIGNSLSPQVIGLLNPGGVPHQPQSDFALSPLT
GGLEPNAGMATSCHGSQRLEALPGLTGMPALPSTQSYCPPTYTSPAYAVDHHPSYQYGQY
SQSKLGQPGKRIPGICGPCSRHFELFLALLGALYQGNDFIFVNCVSHLF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacagcattggcaggaggcttaacgagaatgatgaaacccggtccacaccagaattac
gcacggggaggctgctcccttgaggtgtccactcctctgggccagggtcgtgtcaaccag
ctcggcggcgtattcataaacggccggcctctgcccaaccacatccgccacaagatcgtg
gagatggcccatcacggggttcggccctgcgtcatctcccgccagctgagggtctcccac
ggttgcgtgtccaagatcttgtgccgctaccaggagactggatccattcggcctggagcc
atcggaggaagcaagccaaagcaaagtgcttccccagaactggacaagaagattgaagag
tacaaaagggaaaacccgggaatgttcagctgggaaattagggacaagttattgaaagat
ggcatctgtgacagaaacagcgttccttcagtgagcgccatcagtcgcgtcatgaggtcc
aaatttggcagtttgggtgatgatgacgaggaggatggtgacgaggtggtgaagagggag
atggaagagaacgaatcgaggactaaacacagcatcgatggtatcctgggtgatagatcc
agtcactcggacgagggctccgacgtggactctgagccgggtctgcctctcaagaggaag
caaaggcgcagtcggaccaccttcacggcggagcagctggaggagctggagcgggctttc
gagcgcacgcactatccagacatctacacgcgggaggaactcgctcagagagctaaactc
accgaggctcgtgttcaggtgtggttcagcaacagaagagcccgatggaggaagcaagcg
ggagccaatcagctgatggcgttcaatcacctaatcccaggcggtttccctccattggcc
atgtcagacctgcagccctatcagctgcccgaaagtccctatccggcaacttcaatagcc
caagcaagcgaacagcccagcatggtgcatcgaccgcaacctctgccgcccacgtccgtg
caccagagcgggctcagctcctcgtccagcgctcaggacgcaggttcggcgtactgcctg
tcgtccggacgtcacggcttctcgggatactcggacagcttcgtggccccgacaggacac
gccaacgccgtcaaccccgccgccatcggcaacagcctctcacctcaggtgatcggcctt
ttgaacccaggcggagtacctcatcagcctcagagtgactttgctctctcccctctgact
ggaggcttggagcccaacgccggcatggccaccagctgtcacggctctcaacgactggag
gctttaccgggtctaaccggcatgcccgccctgccgagcactcagtcttactgcccgccc
acctacacgtcgccagcctacgccgttgaccaccatccgtcgtaccaatacgggcaatac
agtcagagcaagcttggtcaacctggaaagagaattcccggcatctgtggtccctgttca
agacattttgagttattccttgccctcttgggggctttatatcaggggaacgacttcata
tttgtcaactgtgtgtcacatttgttttag
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