Syngnathus scovelli (Gulf pipefish): 125987417
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Entry
125987417 CDS
T08785
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 1-like
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125987417
04147 Exosome [BR:
sscv04147
]
125987417
04090 CD molecules [BR:
sscv04090
]
125987417
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125987417
Cilium and associated proteins [BR:
sscv03037
]
Other cilia and associated proteins
Stereociliary proteins
125987417
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125987417
Exosomal proteins of bladder cancer cells
125987417
CD molecules [BR:
sscv04090
]
Proteins
125987417
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Antigens
125987417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_4
Podoplanin
VSP
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
125987417
NCBI-ProteinID:
XP_049607757
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MTTTLTTTIVALLLVLSEWQRLEARDILPQGPVDAVVGKNVTLGTLLESPKYSFIIWNFN
DGRHQIHVATLGAQGLKVNVPFQGRASVDAKSGALLLSALTTADSGNFSVIILSEEGDTE
TAEIQLRVFEPVSGVNLTANMTEALEHNSTVVLTCKAKGSFLNFTWLNGSVPVVPGGRLA
IRQDEASSWLTIVDVLRTDLTQPIYCSATNKLETEKSAPFRLPVHYGPDEVTFTASQESE
FVRAGSNFNLTCAVRSSPPANITWYQNQTLMETTGPVLPLQAVERLPLWQQMSHYMCRAA
NAKTQQVVTSRSVSFAVMKPVSGVQVSGPAQGTVLLASNSSANLSCRAMEGPVSSRLWLK
DGQQLPASGDEGRVMVAPDGTWISLAPLLKGDNGRIVCRLSNAVSTEEAAYQLLVNFGPE
AVTVSGQSAVEVGDAIQLRCSADSVPAANFTWKFNATLTEVKTATYAIDQAVYKNTGTYT
CRAHNVVTGKSATFVHHLSVKEEGALDEGLSDGAIAGIIIAILAALGVAIGLVLYCRQKV
PVESPY
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaccctgaccacgacgattgttgcgctcctgctcgtcctgtctgaatggcag
cgcctggaggctcgcgacattctcccccagggcccagtggacgccgtggtggggaaaaac
gtcaccctggggacgctcctggagtcccccaagtactcgttcatcatctggaacttcaac
gacggtcgccaccagattcacgtggccaccctgggggcccagggactaaaggtgaacgtg
cccttccaggggcgcgcgtccgtggacgccaagagcggcgcgctgttgctaagcgcgctc
accacggccgacagcggaaacttcagcgtcattattttgagcgaggaaggagacaccgag
accgccgagatacagctgcgcgtgttcgagcctgtgtcgggcgtcaacctgaccgcaaac
atgactgaggcgctggagcacaacagcacggtggtcctgacctgcaaggctaaaggctct
ttcctcaacttcacctggctcaacggcagtgtgcctgttgtccctggcggacggcttgct
atccgacaggacgaggcgagcagttggctgaccattgtcgatgtcctgcgcactgacctg
acacaacccatttactgcagtgccaccaataaactagagacggagaagagcgcccccttc
aggctgcccgtccactatggtccggacgaggtcaccttcacggcttcccaagagtcggag
tttgtgcgggccggttccaacttcaacctaacatgtgccgtgcgctccagtccacccgcc
aatatcacgtggtaccagaaccagaccctgatggaaaccaccgggcctgtgctgccgctg
caggctgtggagcggcttcccctgtggcaacagatgagtcactacatgtgccgagctgcc
aacgccaagacccagcaagtcgtcacctcgcgtagcgtttcattcgctgtcatgaagccg
gtgtcgggcgtgcaagtgagcgggccagcccagggcacggtcctgctggccagcaacagc
tcggccaacttgagctgccgtgcgatggaaggtcccgtgagcagccgcttgtggctgaag
gacggccagcagctgccggcgtcgggcgacgagggccgcgtgatggtggcgcccgacggc
acttggatcagcttggcgccgttgctcaagggcgacaacggccgcatcgtgtgccgcctg
tccaatgccgttagcacagaggaggctgcctaccagctgcttgttaactttggccccgag
gcggtgacggtgagcgggcagagcgcggtggaggtgggcgacgccatccaactcaggtgc
tcagccgactcagtgccggccgccaacttcacctggaagttcaacgcgacgctgacagag
gtcaagacggccacctacgccattgaccaggccgtctacaagaacacgggcacctacacc
tgccgggcgcataatgtcgtcaccggcaagagcgccaccttcgtgcaccacctgtccgtc
aaagaggagggcgcgttggatgaaggcctatcagatggcgccatcgccggcatcatcatt
gccatcctggccgcgttgggcgtggccattggcttggtcttgtactgccggcagaaagtt
ccggtggagtcgccatactag
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