Syngnathus scovelli (Gulf pipefish): 125989124
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Entry
125989124 CDS
T08785
Name
(RefSeq) paired box protein Pax-7-like isoform X1
KO
K09381
paired box protein 3/7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125989124
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125989124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
SDA1_dom
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
125989124
NCBI-ProteinID:
XP_049611108
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MTALPGTVPRMMRPASAQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIEQ
YKSDSPGIFSWEIRDKLLKDGVCDRSSVPSGETLAVSSISRILRARFGKKDDEDDDEDEE
CFKKDEEEDKKAKHSIDGILRDKGCRMDEVSDVESEPDLPLKRKQRRSRTTFTAEQLEEL
EKAFERTHYPDIYTREELAQMTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGF
PPTGMPTLPTYQLADSGYPSNILSQDGGGTVHRPQPLPPSTIHQSGLSGNDSASTYGLAS
NRHSFSGYTDTFMTSAPSSHVNPVTTGLSPQVMSILSNPSGISSQSQHDFSVSPLHSMLE
APPPNAVPGPGSQRSAEASIKTADGLPSSQSYCPPTYSTTNYSVDPAVAAVGYQYTQYGQ
TAMNCLAKNVGLSSQRRVKLSDHSGVLGLLQVETGQAY
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgttacccggaaccgtgccgcggatgatgcgcccggcctctgcgcagaactac
ccaaggaccggcttccctctggaagtgtctacacctttaggccagggccgggtgaatcag
ttagggggcgtcttcatcaacggccgacccctacccaaccacatccgccacaagatagtc
gagatggcccaccacggcatccgaccgtgcgtcatctctcgccagctgcgggtatcccac
ggctgcgtgtccaagatcctgtgccgctaccaggagaccggctccattcggcctggggcg
atcggaggcagcaaacccaggcaggtcgcgacgcccgacgtagagaagagaatcgagcaa
tacaagagcgacagcccgggaatattcagctgggagatccgagataaactgctcaaggac
ggcgtgtgcgacaggagcagtgtcccttcaggtgagacactagctgtgagttccatcagt
cgaatactgagagctcgtttcggcaagaaggacgacgaggacgacgacgaagacgaggag
tgctttaaaaaagacgaagaggaggacaagaaagccaagcacagcatcgatggcatctta
agagacaaaggctgtcgaatggatgaagtgtcagatgtggagtcggagcccgatctcccc
ctcaaaaggaagcaacgcaggagtcgcactacgtttacagccgagcagctagaagaacta
gagaaggcttttgagagaacccactaccccgatatttacaccagagaagagctggcccag
atgactaaactcactgaggcgcgagtgcaggtttggttcagcaatcgcagagccaggtgg
cgaaagcaagcaggagccaatcagctagcggctttcaaccatctgttgcctggtggattt
cccccgacagggatgccaacacttcctacataccaactggcagactccggctacccaagc
aatattttgtcccaagatggcggaggtacagttcaccggccccaaccgctacctccctcc
actattcaccagagcggtctatcaggcaacgacagcgcttccacctatggtctagcttcc
aatcgccacagcttttccggctacaccgacaccttcatgacatctgcacccagcagccac
gttaacccggtgaccactgggctttctccgcaggtgatgagcattctgagtaacccgagt
ggcatttcctcccaatcccaacacgatttctcggtgtcgccgctccacagcatgttggaa
gcccctccacctaacgctgtgccaggtcccggcagccaacgttcggctgaggcctccatt
aagacggcggacggccttccgtcctcgcagtcgtactgtccccccacgtacagcaccacc
aactacagcgtggatccggctgtggctgcagtgggctaccagtacacccagtatggccag
actgcaatgaattgtctggccaagaacgtgggcctgtccagccagcgcagggtgaagctg
tccgaccactcgggtgttttgggactactgcaggtggaaaccggtcaggcgtactag
DBGET
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