Syngnathus scovelli (Gulf pipefish): 125989440
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Entry
125989440 CDS
T08785
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04510
Focal adhesion
sscv04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125989440
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125989440
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Oscp1
Ribosomal_S6
Motif
Other DBs
NCBI-GeneID:
125989440
NCBI-ProteinID:
XP_049611781
LinkDB
All DBs
Position
Unknown
AA seq
1845 aa
AA seq
DB search
MVLMTIMALYLMIFMLASCVSGQDLPSSPHGCTDGSCYPATGNLLIGRAVNLSATSTCGL
DSPQHYCIVSHLQESDKCFECNSRHPYDPDRHRNSHRIENVIYLMDSNGDNTWWQSANGE
EIVSIRLNLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPYRYFASNCTRTFPGIS
SNGLHHINDIICEERYSDIEPSTNGEVIYKVLDPAIHVKDPYSLDIQELLRITNLRINFT
KLNTLGDDLLDRRSDVLQKYYYAIYELVVRGSCFCYGHASECAPVPGVDIRANGMIHGRC
VCKHNTEGLNCERCQDFYHDLPWRPAEAENPHTCRECNCNGHSNQCHFDMAVYLATGNIS
GGVCDVCLHNTMGRNCEMCKPFYYQDPNRDIRDPQVCVACDCDPVGSMEGGVCDSHTDPN
MGLITGQCRCKDNVKGLRCDDCKEGYFGLSQNDPLGCQPCNCDPRGIIMMGAPCDQISGD
CSCKRYVTGRYCNQCLPEYWGLSNDLAGCRQCDCDFGGAINNRCMMENGQCDCRSHLIGR
QCSEVEPGFFCAPLDFYKYEAEGATGHSPIDATLPGKVRPQAETDCVQHLNNQLRRHRRH
RRIANPQQHRAALRRIRQLQQTPDVRTVYRELTLSHTVTWTGPGFARVKDSAGLVFHIDN
IPYAMEYNIMIRYEPESTEDWEAIVSITSVNLPSSLRCGNLLPTEQLYTVTLPHRSRYIQ
MPRPFCFEPNNRYVVAIRFQRHGVTHRHLTAFILIDSLVLIPDYTELPGFQGNEIEGEVR
REEMIHYMCLDSFMITPTPTLADVCSKLICSISAIVHDGALPCQCDLQGSLSGECDRVGG
QCRCKPNVMGRQCDQCTPGTYGFGVYGCTACDCHSEGSLSHQCDPVTGQCQCREGASGRR
CSDCQPGQWSFPSCTPCQCNGHADSCDSQTGECKECRDYTAGHHCEQCQDGFFGNALLGS
GDHCRPCSCPGNPGSNHFNGHSCQADHSSNLIMCNCRQGYAGPRCDRCAPGYYGNPEQTG
GQCLPCECSGNIDTQDPESCDSRTGQCLKCLYHTDGPACAQCQQGYYGTALAHDCRRCTC
ATAGTVQSTCSDGHCDCDRQTGACLCKANVTGHNCDQCTPNHWNYGQDQGCEPCNCNLQN
SMGTECNMFSGQCHCHSGFGGKQCTECEQLHWGDPRIQCQECNCHPQGSEVAQCDRTSGE
CQCKEGATGKHCDECARGFTGVFPECLQCHACFQLWDDVVCQLKRDLDYIRHTAEKILKS
GVTPGIGDARIRELEEKLKQVKDLIGNNESEKIHQLLGQSIDDLRAEIALTDGRLMGVVR
ELNTTAEDDDALRQTLSDMEGQLMDLNATVAAKRQQIDDYLISGFEDQFKRVKKYYQESS
EAESKCNTSVSGPLSPVEQSKKTRSNTEDLMNANKEKFLRAMAAQNQSMEELQQKAHELD
HKTRHLSKKMCGGPGTASINGSCEDNPCGGAGCRDDEGSRICGGDGCNGTVSASVSALSL
AKNVTTDLEAANEELHNVAKKLQDIASLSQDVKNQAMNTLARAQKNKDHFEKSNRELKEL
IKKIKDFLTEDGANPESIEKVAMQVLAIQLPVNKTTVDTIIMQINTSLSNLTDIDAILGN
TSQHISQAKQLLEEAKDAKSRAEVVKDAANGTKTALDLSEKAIEKARSALKETLTNLNGT
KNATSEVVDRLTQLEAKQMEIMMRLNNLTTDIEALRNKTEHNRDMAKDAKALADNATLQA
DSLLESLNDTNLRYNELREKVDSLGSGSQGLDAINRKVEELKKEAENLLNKANKSMEQLK
QLEKKFKSNEQRMQEQRTELDELKENATLVRDVIRDQVQKYGSCS
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatgaccatcatggctttgtatctgatgatcttcatgctggcctcatgtgtg
tctggacaagacctgccatcaagcccacatggctgcacggacgggagttgctaccctgcc
acgggaaatctcttgattgggcgtgctgtgaacctgagtgccacctccacttgtgggctg
gacagtccacagcattactgcattgtcagccatctccaggagtcggacaaatgttttgag
tgtaactcccggcatccgtatgacccggaccgacacagaaacagccaccgcatcgagaac
gtgatttacctcatggacagcaacggtgacaacacgtggtggcagtctgctaatggagag
gaaattgtcagtattcgacttaacctggaagccgaattccacttcacgcatttaattatg
aagttcaagactttccgtcccgcagcgatgataattgagcgttctgctgattttggtcga
acatggcgtccctaccgctactttgcctccaactgcaccaggacctttcctggtatctcc
tcaaatggcctgcaccacattaacgacatcatctgcgaagaacgctactctgacattgag
ccctccaccaatggggaggtcatttataaagtgttggatcctgccattcatgtgaaagac
ccctacagcttggacattcaagagctcctgcgaatcaccaacctgcgcattaacttcaca
aagttgaacactctgggggacgaccttttagaccgacgttctgacgtccttcaaaaatat
tactacgctatctacgagctggttgtcagagggagctgcttctgttacggacacgcctcg
gagtgcgcccctgtgccaggggttgatatccgagccaacggcatgatccacggtcggtgt
gtttgcaaacacaacacagaggggctcaactgtgaacgttgccaagatttctaccacgat
ctgccatggaggccggctgaggccgaaaacccgcatacctgtagagagtgtaattgcaat
ggccactcaaaccagtgtcactttgacatggcggtatatttggccacgggcaacatcagt
ggaggagtatgtgatgtctgtttgcacaacaccatgggacgcaactgtgagatgtgcaaa
cctttctactatcaagacccaaatagagatattagagacccccaggtttgtgttgcctgt
gactgtgatccggtgggctcaatggagggaggcgtgtgcgacagtcacaccgacccaaac
atgggcttgatcactggtcagtgccgctgcaaagacaacgttaaaggcttgcgctgtgac
gactgcaaggagggctattttggactcagccaaaacgaccctctgggttgccaaccttgc
aactgtgatcctcgtggcatcattatgatgggagccccatgcgatcagatcagcggcgac
tgctcttgtaaaagatatgtcactggtcgctactgcaaccagtgtctgcctgaatactgg
ggtctcagtaatgacctggctggttgcagacaatgtgattgtgactttggtggagccatc
aacaacaggtgtatgatggagaatggacagtgcgactgcaggagccatctgattggtcga
cagtgctctgaggtggagcctggctttttctgcgcgccattggacttctacaaatatgag
gccgaaggggctactggacattcacccattgatgctacgttacctggcaaagttcgacct
caggcagagacagactgcgttcagcacctcaacaaccagctgagaagacacaggcgtcac
cggcgtatcgccaacccgcagcaacaccgcgcagcactgaggcggatccgacagcttcag
cagacaccggatgtgaggaccgtttacagagagctcaccctaagtcacacagtgacttgg
accgggcctggttttgctcgggtcaaagatagtgctggcttggtgtttcatattgacaac
attccctacgccatggagtacaacatcatgattcgttatgaacctgagtccacagaggac
tgggaggccattgtcagtataacatctgtgaacctgccttccagtctccgctgtggaaac
cttctaccaactgagcagctctacacagtcactttgccacatcgcagcagatacatccag
atgccaaggccgttctgttttgagccaaataatcgttatgtggttgccatccgcttccag
cgccacggagtgacccacagacatcttacagccttcattcttattgattcgttggttctg
atccctgattataccgagcttcctggtttccaaggcaatgagattgaaggagaggtacga
cgtgaggagatgattcactacatgtgtctggattcctttatgatcacgccaacgcccacc
ttggccgatgtgtgctccaagctcatctgcagtatttcggctatcgttcatgatggagca
ctgccctgtcagtgtgatcttcaagggtccctctcgggtgaatgtgatagggtcggagga
cagtgccgctgtaagcccaacgtgatgggccgacaatgtgaccagtgtactccaggaacc
tatggctttggagtctatggttgtactgcttgcgactgtcattcagagggttctctgagc
caccagtgtgaccccgttaccggccagtgccagtgccgggagggagcatctggccgccgg
tgctctgattgccaacccggccagtggagcttcccgagctgcacgccctgtcagtgtaac
ggccatgcagacagttgcgattcccaaaccggcgagtgtaaagaatgccgagactacaca
gccggtcatcattgcgaacagtgtcaggatggattctttggaaacgcattgcttggctca
ggggaccactgtcgcccctgctcttgcccgggtaatcccggttcgaatcactttaacggc
cactcctgccaagctgaccactcttcgaacctcataatgtgtaactgcagacaaggctat
gctgggcctcggtgtgaccggtgcgcccccggttactacggcaacccagagcaaactggc
ggccagtgccttccatgcgagtgcagcggcaacattgacactcaagacccggagtcatgt
gactctaggacaggtcaatgcctcaagtgcctgtaccacacagatggtccagcttgtgcc
caatgccaacagggttactatggcactgctttggcccatgactgtagacgctgtacctgc
gcgactgctggtactgtccagtcgacttgcagcgacggacactgtgactgcgatcgtcag
acaggtgcttgcttatgcaaggcaaacgtcaccggccataactgtgaccaatgcactcct
aaccactggaactacggtcaggaccaaggctgtgagccctgtaactgtaacctgcaaaat
tccatgggaactgaatgcaatatgttcagtggtcagtgccactgccactcgggcttcgga
gggaaacagtgcacagagtgtgagcagctccactggggagacccacggatacagtgtcaa
gagtgtaactgccatcctcagggctcagaagtagcacagtgtgaccggaccagcggagaa
tgccagtgcaaggagggcgcaaccgggaaacactgcgacgaatgtgcccgcggcttcacc
ggcgttttccccgagtgcttgcagtgtcacgcctgtttccagttgtgggatgacgtggtg
tgtcagctcaagcgtgatctagattacatccggcacactgctgaaaagatcctgaagagt
ggtgtcacacctggaatcggcgacgctcgaatcagagagctggaggagaagctgaagcag
gttaaggatctgattggcaataatgaaagcgaaaaaatccaccaactgcttggacaaagc
atcgatgacctaagggcggagatcgcgttgaccgacgggcgtcttatgggtgtcgttcga
gagctcaacacaacagcagaggacgacgatgcactgagacagacgctgagcgacatggag
ggacagttgatggaccttaacgccacggttgctgcgaaacggcagcagatagatgactac
ctcatctcaggatttgaagatcagttcaaaagagtgaagaaatactatcaggaatcatca
gaggcggagtccaaatgcaacacgtcagtgtctggtccccttagtccagtggaacagtcc
aaaaaaactcgctccaacactgaagatctgatgaatgctaataaagaaaagttcctccgt
gccatggcagcccagaatcaatctatggaggaactgcagcagaaagcccatgagctggac
cacaagacccgccacctcagtaaaaagatgtgtgggggccccggtactgctagcatcaac
ggcagctgcgaagacaacccatgcggtggtgctggttgccgtgacgatgagggcagccgt
atatgtggaggggacggatgcaatgggacagtaagcgcttccgtatctgcgctaagtctc
gccaagaatgtcaccaccgatctggaagctgctaatgaggagctgcataacgtggccaag
aagctccaggatatcgcgtctttgagccaggatgtgaagaatcaagccatgaacaccctg
gcgagagcccagaagaacaaagaccactttgaaaaatcaaatagggagctcaaagagctt
atcaagaagataaaagatttcctcaccgaggatggagcaaatccagagagcattgagaag
gtggccatgcaggttttggccattcagctgccagtcaacaagaccacagtggacacaata
atcatgcaaatcaacaccagcctttctaacctgaccgacatcgatgccatcctcggcaat
acctcccagcacatcagtcaagccaagcagcttttggaagaagctaaagatgccaagagt
agagctgaggtagtgaaagatgcagccaatggtacaaagacagccttggatctgtctgaa
aaggccatcgaaaaagcaagaagcgccctgaaagagactttgaccaacctgaacggcacc
aaaaacgccacttctgaggtggttgacagattaacacaattggaagccaagcaaatggag
atcatgatgcgcctaaacaacctcaccacagacatcgaagcactgagaaacaaaactgag
cacaacagggacatggcgaaggacgccaaagctttggccgacaacgccacgctccaagcg
gactcgcttctggagagcctcaacgacaccaatttacgctacaatgagctgcgggagaag
gttgactctcttggcagcggctctcaaggattggacgccatcaaccggaaggtcgaggag
cttaagaaagaggcagaaaatcttcttaataaagctaacaagagcatggagcagctcaag
cagctggagaagaagttcaagagcaacgagcagcggatgcaagagcagcggacggagctt
gacgagctgaaggaaaacgccactttggtccgggacgtcatccgggaccaagtgcagaag
tacggcagctgctcgtga
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integrated database retrieval system