Syngnathus scovelli (Gulf pipefish): 125990989
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Entry
125990989 CDS
T08785
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125990989
Enzymes [BR:
sscv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
125990989
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125990989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
125990989
NCBI-ProteinID:
XP_049614403
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
METLRVLELYSGIGGMQYALKQSGISGQVVAAIDINTTANQVYRHNFPDTPLWNRTIEGI
SLDEFKNLQFDMILMSPPCQPFTRLGRQRGIADPRTKSFLYILNLLPRLSQLPRFILLEN
VKGFESSSARQYFVQILMECGYIFQEVMVSPTSVGIPNSRLRYFLMAKISTESICSNSKD
LQMSPLTAETESSVEPSLSSPQKPVTSSLEKEEGMEDCVLYKLETANDAQRKLNQNRNLS
IRQIQDFLEPQENDDMDQYLVPSDVLLRYALILDIVKPICRRSICFTKGYGRYVEGTGSV
LQCYLETEIESVFKNLDQFSEEEKLQQLQGLKLRYFTPREVANIMGFPKSFSFPDQIPTR
QRYKLLGNSLNVVVVTKLLHQLLSKWVSPSTRSCRECRSWRNVSSAPPDYSLRASRNVYT
FVLKSGCPRKRNAHLFVYVEGH
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctgcgagtgcttgagctttacagtggaataggtgggatgcaatatgctcta
aaacagtctggaatatctggccaagtagtggctgctattgacataaacacaactgcaaat
caggtctacaggcacaatttcccggacaccccactctggaacagaaccattgagggcata
tcgcttgatgagtttaaaaatttgcagtttgacatgattttgatgagtcctccttgtcaa
ccttttaccaggttgggacgccaacgtggtattgctgaccctagaacaaagagctttctc
tacattcttaatcttctgccaaggctgagtcagcttccccgctttatcctgcttgagaat
gtcaaaggttttgagagctcctcagccaggcagtattttgtccaaattctgatggaatgt
ggctacattttccaggaggtgatggtctctcccacaagtgttgggatcccaaattcaaga
ctgcgttacttcctgatggcaaagatttcaacagaatcgatttgttcaaattcaaaggat
ttacaaatgtcaccgctcactgctgaaactgagtcctctgtggagccttcgctttcaagt
cctcaaaagccagttactagttccctggaaaaagaggaagggatggaagattgtgtcctt
tataaacttgagacggcaaatgatgcacagagaaagttgaatcaaaataggaatttgtcc
atcaggcagatccaagacttccttgaaccacaggagaatgatgacatggatcagtatctt
gttccatctgacgtattgctgcgttatgctttaatcctggatattgtcaaacccatctgc
cggaggtcgatttgcttcactaaaggctatggacggtatgtggaaggaactggctcagta
ttgcaatgctacctggagacagagatcgagagtgtgtttaaaaatctggaccaattctct
gaagaagaaaaacttcaacaactgcagggactgaagcttcgttattttaccccaagagaa
gtcgccaacataatgggcttcccaaaaagcttttcttttccagatcaaatccccaccagg
cagcgttacaaacttctaggaaacagcctcaatgttgtggtggtgacaaaactgctacac
cagctgctctccaagtgggtttctccttcgacacgatcctgtagggaatgccgttcttgg
agaaatgtctcctctgcgcctcccgactacagtttgcgggcgagcaggaatgtatatacc
ttcgttctcaaatcgggttgcccaaggaaacggaatgcccacctgtttgtctatgtcgag
gggcactaa
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