Syngnathus scovelli (Gulf pipefish): 125991454
Help
Entry
125991454 CDS
T08785
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9 isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00310
Lysine degradation
sscv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125991454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125991454
03036 Chromosome and associated proteins [BR:
sscv03036
]
125991454
Enzymes [BR:
sscv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
125991454
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125991454
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
125991454
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125991454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
PRDM2_PR
zf-H2C2_2
zf-C2H2_jaz
SET
Gmx_para_CXXCG
Motif
Other DBs
NCBI-GeneID:
125991454
NCBI-ProteinID:
XP_049615328
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MSCTTSTVEWVESTGQVVIIEGCLPTDGVDAAGIPPIQKLLVGNGEAEEGFCCEECLALY
QDQSDPFKTSGPSFILDFPTSMGVPERALLTLPYGLTVGRSSIPGAGVGVINHGLALAPG
MHFGPFEGEETSMENAIKSDFSWEIYKAQEAYEYIDASTETFSNWMRYVKRARNRDESNL
LAVQYKGSILYHCCRGVNAGEELLVWPSDKLLARFSETWMQFWVTKLQTAADSVSPEASQ
VFVCGHCQLSFTTEAFLQHHADCFHSHQRQKSHSDETEPDNPGADAGISAPALTPLPDAV
MTMACSDCGKTFKQASHLKRHELCVHRNRRPYCCTLCRRSFSQASGLLRHQVVHRKPAAP
LLAENGQQVGDAQEEASNTPEVTTTSEQPSDEKDKISSEAGEQEVDEQPHVCAECGKTFR
VKAFLKKHKALVHDKIRPFVCTLCKRCFGQCSDLTRHLQRHRTRRTGRPRARRLSGPPAE
MPFSCGQCSVDFSTVALLQLHIGASHSEEVGQRDNPDSSSKPPDAVTRPPCERPRRHASK
YKISLITQLDGEELSKRKFFRCNHCHESYADPDELRAHACEQQRHTCAICGSTFGRSVFL
RRHERTVHRSVPQRRCEHCSKVFVESAGLEQHRRADNCRKYHCTTELFSCAHCQFSFTAK
SFLAKHVRRHHPAEYRADSSAYLPEEEQDVKVFMCSRCKKDYSNAKAFKSHSCFQQVKVL
YFCADCGKGFGNRYTLKQHRLTHTGEKPHGCPHCAKAFANSSQLTVHLRTHTGEKPYLCT
HCGESFRQSGDLKRHERKHTGVRPHKCEQCCKSFSRPQSLKAHRMLHMGQRMFTCTVCSK
SFSRNYHLRRHHRKMHT
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcacgaccagcaccgtggaatgggtcgagtccaccgggcaagttgttatcata
gaaggctgcttgcccaccgacggcgtcgacgcagctgggattccaccaatccagaagttg
cttgtcggtaatggagaggctgaagaaggcttttgctgtgaagagtgccttgcgctctac
caagaccagagcgaccccttcaagaccagcggcccatcttttatccttgattttcccaca
agcatgggcgtccccgagagggccctcttgacattgccctacggcttgacggtgggccgc
tccagtattcccggcgcaggtgttggggtcatcaaccacgggctggcgcttgctcctggg
atgcattttggaccgtttgagggggaagagacgagtatggagaacgccatcaaaagtgac
ttttcctgggagatttacaaagcgcaagaagcttatgagtacattgatgcttccacagaa
acgttttcaaactggatgaggtatgtcaagcgtgctcgcaacagggatgagagcaatctg
ctggcagtgcagtacaaaggcagcatcttgtaccactgctgccgcggcgtcaacgctgga
gaagagttgctggtgtggcccagcgacaagctccttgcacgctttagcgagacttggatg
caattttgggtaaccaagctccagactgcagcagatagcgtctcacctgaagcctcacag
gtttttgtgtgcggccactgtcagctgagcttcaccaccgaggccttcctccagcaccac
gccgactgcttccactcacatcaacggcagaaatcgcattctgatgaaaccgagccagac
aatcccggcgcagacgccgggatctctgcccctgctctgacgccacttccagacgcagtc
atgacgatggcctgctccgactgcggtaagactttcaagcaagcgtctcacttgaagagg
cacgaactgtgcgtgcaccggaacaggcgcccttactgctgcacgctgtgccggcgtagc
ttcagccaggcgtcaggtttgctccgacaccaggttgttcacaggaagcccgctgcgcca
cttttagcagaaaatggccagcaggttggggacgcccaagaagaagcttccaacacgccg
gaagttacgacgacgagcgagcaaccgagtgatgagaaggacaaaatttcaagtgaagct
ggagagcaagaagtggatgagcagccccacgtttgcgctgagtgcggtaaaactttccgt
gtcaaagcgttcctcaaaaagcacaaggcgctggtgcacgacaagatccgtccattcgtg
tgcaccctctgcaagcggtgcttcggccagtgcagcgacctcacccgccacctgcagcgc
caccgcacgcgacgcacaggccgcccgagagctcgccgtttgtccgggccgcccgccgag
atgccatttagctgtggccagtgttctgtcgacttctccaccgtggccctcctccaactg
cacatcggcgccagtcactcggaggaggtcgggcagcgggacaatcccgattccagttcg
aaacccccggacgctgtcacgaggcctccctgtgagaggccccggcgacacgcctccaaa
tacaaaatatccctcatcacccagctcgatggcgaggagctctccaaacgcaagtttttc
cgttgcaaccactgtcatgaaagctacgccgacccagacgagctgcgggcgcacgcgtgc
gagcagcaacgccacacgtgcgccatctgcggctcgacgttcggccgctcggtcttcctg
cggcgccacgaacggaccgtccaccgcagcgtgccacaacgccgctgcgagcactgcagc
aaggtttttgtagagtccgcgggcctggagcagcaccggcgagccgacaactgcaggaag
taccactgcaccaccgagctcttctcctgcgcccattgccagttctccttcaccgccaag
agcttcctcgccaagcacgtccgcaggcaccacccggcggagtaccgggccgacagctcg
gcgtatctgccggaggaggagcaggacgtcaaagtgtttatgtgctcgcgctgcaaaaaa
gactactccaacgccaaagcctttaaaagccactcgtgcttccaacaggtaaaggtgctc
tacttctgcgccgactgcggcaagggcttcggcaaccgctacaccctaaagcagcaccgg
ctcacgcacacgggcgagaagccgcacggctgcccgcactgcgccaaggccttcgccaac
tccagccagctcactgtgcacttgcgcacacacacgggcgagaagccctacctgtgcacg
cactgcggcgagagcttccgccagtcgggcgacctgaagcggcacgagcgtaagcacacg
ggcgtgcggccccacaagtgcgaacagtgctgcaagagcttcagccggccgcagagcctc
aaggcccaccgcatgctgcacatgggccagcgcatgtttacctgcaccgtgtgcagcaag
agcttctcgaggaactatcatttgcgtaggcaccaccgcaagatgcacacctga
DBGET
integrated database retrieval system
