Syngnathus scovelli (Gulf pipefish): 125993945
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Entry
125993945 CDS
T08785
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125993945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_3
Ank_4
Ank_5
EGF_3
cEGF
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
125993945
NCBI-ProteinID:
XP_049618939
LinkDB
All DBs
Position
Unknown
AA seq
2410 aa
AA seq
DB search
MPIFLAKVTLVLWLIGLARGLRCSMPTESCLNQGRCDATPDGNGQCKCRDGYTGNRCQFR
DPCPSGTCLNACVGTPCRNGGTCQLDGLQAYKCHCPPGWSGNQCQYPDPCASNPCANDGR
CSAIESQYVCTCTPFFSGKTCKQDVNECDASPPPCKNGGSCVNTVGGYHCRCPAEYSGQR
CESRYLPCSPSPCQNGGTCVQKGDTSYECTCVPGFTGKNCNQNIDDCPGHECQNGGTCVD
SVNSYNCRCQPEFTGQLCTEDVDECQLMPNACQNGGTCHNTYGGFQCVCVNGWAGDDCGE
NIDDCASAACSHGSTCHDRVASFVCECPPGRTGLLCQLDDACISNPCQKGSNCDTHPVSG
NHMCTCPPGYLGASCDQDVDECSLGPNPCEHAGKCINTKGSFQCKCQRGYVGPRCELDVN
ECMSNPCMNEATCLDQIGAFHCICMPGYEGEFCEIDTDECDHSPCMNGGKCIDKINAFLC
QCPTGFTGHLCQIDIDECASTPCKNGARCTDGPNMYTCECTEGYTGRHCETDVYECLSDP
CHYGSCVDGLASFSCLCHPGYTGRLCETNINECLSQPCRNGGVCQDRENAYICNCPTGTT
GINCEVNIDDCKSNPCDYGTCIDKINGYECACKPGYTGAMCNINIDECAINPCHNGGTCI
DGINHFTCVCPEGYHDATCFSQINECLSNPCVHGHCEDKINGYKCLCDSGWSGQNCDINN
NECESNPCMNDGTCKDMTSGYVCTCHVGFTGPNCQTNINECASNPCLNQGTCIDDVAGYK
CNCVLPYTGENCESVMAPCSGKPCKHAGVCQESEDYQSFSCVCPEGWQGQTCEVDIKECV
KNPCLNGATCQNTLGSYRCGCKPGFTGRNCETDIDDCKPNPCGNGGACQDRANGFLCTCQ
PGFRGPACDEDINECESHPCKNGANCTDCVNSYTCTCPPGFSGIHCENNTPDCTESSCFN
GGTCVDGINTFTCLCPSGFTGSYCQHDINECDSRPCLHGGTCQDSYGTYKCVCPHGYTGL
NCQNLVSWCSSSPCKNGGNCWQRGTAYSCECQTGWAGVYCDIPSVSCEVAAKQRGVDVDN
LCRNSGRCLDAGNVHRCHCQVGYTGSYCEEQVDECTPNPCQNGATCVGFLGGYTCKCSPG
FAGTNCSDEINECFSQPCQHGGTCIDLINTYKCSCPRGTQGVNCEINVDDCMPLADPLTK
EPKCFNHGRCVDGVGGYHCLCPPGYVGERCEGDVNECLSNPCDPRGTHRCIQLANNYRCE
CRTGFTGQRCDAVFDGCKGKPCRNGGTCAVASNTPNGFICKCPPGFTGSTCEYNGHTCGS
LRCHNGGTCISGQKSPKCLCAPFFTGPECQYPGDSPCKSNPCYNSGTCEDAAKAPYYRCV
CPANFNGLWCHILDYSSPGGPGHDLAPPPLSAADEACEIPQCEERKHNQVCDVLCNNHAC
GWDNGDCSLNFDDPWKNCSASLQCWRYFNDGKCDAQCDNAGCLYDGFDCQNLEGQCNPLY
DQYCKDHYADGHCDQGCNNAECEWDGLDCADNMPEKLALGQLVVVVLIMPEQLLNNSFGF
LRELSRVLRTNVVFRMNAEGETMVYPYYGSEQELKKYIVKRSVDTWSDVPGKVVNVVKRS
IDGLRWTKRELDHVQIKGSIVLLEVDNRQCVQQSSECFQSTTDAAAFLGALASSGKLDVP
YTIEAVYSGADPQPPQELYPLYLVVGTLAVLALVGVGMVAARKRRHEHGRLWLPEGFKTT
EPSKKKRREPVGEDSVGLKPLKNTSDISLMDDGHDWGEDETSDAKRFRQFDELAVLDAGE
RKDNRQWTQQHLDAADLRVPSVAPTPPQGEIDSDCMDVNVRGPDGFTPLMIASCSGGGLE
TGNSEEEEDASANVINDFIYQGASLHNQTDRTGETALHLAARYARSDAAKRLLEASADAN
IQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMVDELI
NCHADVNAIDDFGKSALHWAAAVNNVAAAVVLLKSGANKDMQNNKEETPLFLAAREGSYE
TAKVLLDHFANREITDHMDRLPRDIAQERMHHDIVRLMDEYNLVRSPTMHAGALGNALSP
PLCSPNGYLGGMKQPPPQGQGPAGGKKARKPGTKVCKDAKDMKVKKKNSQDGKPPGSLLD
SSAVLSPVDSLESPRGYGSDAASPPVMTPAALSHLQTMSDPHMGVGHMVMPSKQELARMQ
FDPLPPRLTHMPVSGSTGQCDWMSRMQFGAMRNSAQHGMMTGPHSGHPQMMAYASIPSNR
LNPIMQQMQNLQQLQNQNFINADLSPPELQQGPVPIRTILPQEAQIMPAAMGAQFLTPPS
QHSYSGPVDGNTPSHQVQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSMPA
QMGHLAEQFK
NT seq
7233 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttttttggcgaaagtaactttagtgttgtggctgattggactagcacgtggc
ctgagatgctccatgcccaccgagtcatgtttgaaccaggggagatgtgatgccactccg
gacggcaacggacagtgcaagtgtcgagatggatacaccggaaacaggtgccagtttcgc
gacccgtgccccagcggaacttgcttgaacgcctgcgttggcacgccgtgccgcaacggg
ggtacctgtcagctggacggcctgcaggcgtacaagtgccactgtccgcccggatggtca
ggtaaccagtgccaataccccgacccctgcgcgtccaacccgtgcgcaaacgacgggcgc
tgctcggccatcgagtcgcagtacgtctgcacctgcacgcccttcttctcgggcaagacc
tgcaagcaggacgtcaacgagtgcgatgccagcccgccgccgtgcaagaacggcggctct
tgcgtcaacacggtcggcggctatcactgccgctgcccggccgagtactccggccagcgc
tgcgagagccgctacctgccctgtagcccgtcgccgtgccaaaatggaggcacctgcgtc
cagaagggagacaccagctatgaatgcacctgtgtgccaggcttcacggggaaaaactgc
aaccagaacatcgacgactgccccggtcacgagtgccagaacggcggcacttgcgtcgac
agcgtcaactcttacaactgccggtgtcagcctgagttcacaggtcaactgtgcacggag
gacgtggatgagtgccagctgatgcccaacgcctgccaaaacggcggcacgtgccacaac
acctacggcggcttccagtgcgtgtgcgtcaacggctgggcgggcgacgactgcggcgag
aacatcgacgactgcgccagcgccgcctgctcccacggctccacctgccacgaccgcgtg
gcctccttcgtctgcgagtgtccccccggccgcacaggtctgctctgccagctggatgat
gcctgcatcagcaacccttgtcagaaaggctccaactgcgacacccaccccgtcagcggg
aatcacatgtgcacctgccctccgggctacctgggggcatcctgtgatcaagacgtcgac
gagtgctcactaggtcccaacccgtgcgagcacgccggcaagtgcatcaacaccaagggc
tcgttccagtgcaagtgccagcggggttacgtggggccgcgctgcgagctggacgtcaac
gagtgcatgtccaatccgtgcatgaacgaggccacctgcctggaccagatcggagccttc
cactgtatctgcatgccaggctacgagggggagttctgcgagatcgatacggacgagtgc
gatcacagcccctgcatgaacggcggcaagtgtatcgacaagatcaacgccttcctatgc
cagtgccccacaggtttcactgggcatctttgccagatcgacatcgatgagtgtgccagt
acgccgtgcaaaaatggtgccaggtgcacagacggacccaacatgtacacctgcgagtgc
acagagggttacaccgggcggcattgcgagacggatgtgtacgagtgcctctcagacccg
tgtcactacggctcctgcgtggacggcctggcctctttcagctgtctttgtcacccgggt
tacacgggacggctgtgcgagaccaacatcaacgagtgtctcagccagccgtgcaggaac
ggtggcgtctgccaggaccgggaaaatgcctacatctgcaactgccccactggaaccacc
ggaatcaactgtgaagtcaacattgatgactgcaagagcaacccgtgtgactacgggacc
tgcatcgacaagatcaacggttatgagtgtgcctgcaagcccggatacactggcgccatg
tgtaacatcaatatagacgagtgcgccatcaacccgtgccacaacggcggcacgtgtatc
gacggcatcaaccacttcacctgcgtgtgtcccgagggctaccacgacgccacctgcttc
tcgcagatcaacgagtgtctcagcaacccctgtgtccacggccactgcgaggacaagatc
aacggctacaaatgcctgtgcgactccggctggagcggccaaaactgcgacatcaacaac
aacgaatgcgagtccaacccgtgcatgaacgacggcacgtgcaaggacatgaccagcggc
tacgtgtgcacttgccacgtgggcttcactggaccaaattgtcaaaccaacatcaacgaa
tgtgcctccaacccctgcctcaaccaggggacgtgcatcgacgacgtggccggctacaag
tgcaactgtgttctgccttacacgggagaaaactgcgaaagcgtaatggccccctgcagt
ggcaaaccttgcaaacacgctggagtgtgtcaggagtcggaagactatcaaagcttctcc
tgcgtctgccccgaaggatggcaaggtcaaacgtgcgaggtggacattaaggagtgcgtg
aagaatccctgcctcaacggagccacctgccagaacacgctgggaagttatcgctgcggc
tgcaagcccggcttcaccggacgcaactgtgaaactgacattgacgactgcaagccgaac
ccatgcggcaacgggggtgcgtgtcaggaccgagccaacggcttcctgtgcacgtgccag
ccgggctttcggggcccggcgtgcgatgaagacatcaacgagtgcgagagccacccgtgc
aagaacggtgccaactgcaccgactgcgtcaacagctacacctgcacctgcccgcccggc
ttcagcggcatccactgtgaaaacaacacgcctgactgcacagaaagctcctgtttcaac
ggcggcacgtgcgtggacggcatcaacaccttcacgtgcctgtgcccgtccggcttcacc
ggcagctactgtcagcacgacatcaacgagtgcgactccagaccctgcctgcacggcggc
acctgtcaggacagctacggcacctacaagtgcgtgtgtccgcacggatacacgggactc
aattgtcagaatttggtgagctggtgcagctcgtcaccttgcaagaacggaggtaactgc
tggcaaaggggtacggcctacagttgcgagtgccagactggctgggcgggcgtctactgc
gacatacctagcgtctcctgcgaggtggcagccaaacaaagaggggtggatgtcgacaac
ctgtgccgtaactcaggccggtgtctggacgcaggaaacgtccaccgctgccactgccag
gtgggctacactggcagctactgtgaggaacaagtggatgaatgcactcccaacccctgt
caaaatggagccacttgtgtgggctttcttggaggatacacttgcaagtgctcgccaggc
ttcgcggggaccaactgctccgacgagatcaatgagtgcttctcccaaccgtgccagcac
gggggcacctgcattgacctgatcaatacctacaaatgctcctgtccccggggaacgcaa
ggcgtcaactgcgagatcaacgtggacgactgcatgccgctggccgacccgctcaccaaa
gagcccaagtgtttcaaccacggcaggtgcgtggacggcgtgggtggctaccactgcctg
tgcccgcccgggtacgtgggcgagcgctgcgaaggtgacgtcaacgagtgcctctccaac
ccgtgcgacccgcgcggcacgcacaggtgcatccagctagccaacaactaccgctgcgaa
tgtcgtaccggattcacaggtcagcgctgtgacgccgtgttcgacggttgcaaggggaaa
ccgtgtcgcaacgggggcacttgcgccgtggccagtaacactccaaacggcttcatatgc
aaatgtccgcctggcttcactggctccacatgcgaatacaacggccacacttgcggcagc
ctccgatgccacaacggcggcacctgcatctcgggccaaaagagtcccaagtgtctgtgc
gcgccgtttttcacggggcccgagtgccagtaccccggcgacagcccgtgcaaatccaac
ccctgctacaactcgggcacgtgcgaggacgccgccaaggcaccgtactaccgctgcgtc
tgccccgccaacttcaacggcctctggtgccacattctggactacagctccccgggcggg
ccgggtcacgacctggcgccgccgccgctgtcggcggccgacgaggcctgcgagatcccg
cagtgcgaggagcgcaagcacaaccaggtgtgcgacgtgctgtgcaacaaccacgcgtgc
ggctgggacaacggcgactgctcgctcaatttcgacgacccgtggaagaactgctcggcc
tcgctgcagtgttggcgctactttaacgacggcaagtgcgacgcgcagtgcgacaacgcc
gggtgcctctacgatggatttgactgccagaatctggaaggacagtgcaacccgctgtac
gaccagtactgtaaagaccactacgccgacggccactgtgaccagggctgcaacaacgcc
gagtgcgaatgggacggcttggattgcgccgacaacatgcccgagaagttggccctgggc
cagctggtggtggtggtcctcatcatgcccgagcagctcctcaacaactccttcggcttc
ctgcgagagctcagtcgcgtcctgcgcaccaacgtggtgttccggatgaacgctgagggc
gagaccatggtctacccttactacggcagcgagcaggagctgaagaagtacatcgtcaag
cgctcggtggacacctggtccgacgtgcctggcaaggtggtgaacgtggttaagagaagc
atagatgggcttcggtggacaaagagggagctggatcacgtgcagatcaaaggctccatc
gtgctcttggaagtggacaaccgtcagtgcgtccagcagtccagcgagtgcttccagagc
accaccgatgccgccgccttcctcggggcgttggcctccagcggaaaactggacgttccc
tacaccattgaagctgtttatagcggcgccgacccgcagccgccgcaggagctctacccg
ctctacctggtggtgggcaccctggccgtgctggccttagtcggcgtgggcatggtggct
gcccgcaagcgccggcacgagcacgggcgcctctggctccccgagggtttcaagaccacc
gagcccagcaagaagaagagacgcgaacccgtcggggaggattctgtgggattaaagccg
ctgaaaaatacctcggatatttcactcatggacgacggccacgattggggagaagatgag
acttcggatgccaaacgcttcaggcagtttgacgagctcgccgtcctggatgcgggcgag
cgcaaggacaaccggcagtggacccagcagcacctggacgcagccgacctgcgcgtcccc
tccgtggcgcccacacccccacagggcgagattgacagcgactgcatggacgtcaacgtg
cgaggaccagatggcttcacaccgctgatgatcgcatcctgcagcggtggcggcctggag
acgggcaacagcgaggaggaggaagacgcctcggccaatgtcatcaacgactttatctac
cagggcgccagcctccacaaccagacggaccgcaccggcgagacggcgctgcacctggcc
gcccgctacgcccgctccgacgccgccaagcggctgctggaggccagcgccgacgccaac
atccaggacaacatgggcaggaccccgctgcatgccgccgtggccgctgacgcccaggga
gtcttccagattctaataagaaaccgcgccaccgacttggacgcccgtatgcacgacggc
accacccccctcatcttggccgccaggctggcagtggagggcatggtggacgagctcatc
aactgccacgctgatgtcaacgccattgatgattttggcaagtcagcgttacattgggcc
gccgctgtgaataacgtggcggctgctgtcgtgctgctcaagagtggcgccaacaaggac
atgcagaacaataaggaggagacgccgttgtttttagcagcccgggagggaagctacgag
acggctaaagtcctgctggaccactttgccaaccgggagataacagaccacatggacaga
cttccccgagacatcgcccaggagcgaatgcatcacgacatcgtccgtctgatggacgag
tacaatctggtgcggagtcccaccatgcacgcaggtgccctgggtaacgccttgtcgccc
ccgctctgctcccccaacggctacctgggcggcatgaaacagcccccgcctcagggccag
ggcccggcgggcggcaagaaggctcgcaaacccggcaccaaggtctgcaaggacgccaaa
gacatgaaagtgaagaagaagaactcgcaggatgggaagccgcccggcagcttgctggac
agctcggccgtgctctccccggtggattcgctggagtcgcctcgcggctacggctcggac
gccgcgtccccgcccgttatgacgcccgcggcgctgagccacctccaaaccatgtcggac
ccgcacatgggcgtcggtcacatggtcatgcccagcaagcaggagctggcacggatgcaa
ttcgacccgctccccccacgcctcactcacatgcccgtgtctggatccaccggccagtgc
gactggatgtccaggatgcagttcggcgccatgaggaacagtgctcagcacgggatgatg
actggcccccacagcgggcaccctcaaatgatggcctacgcgagcattcccagcaaccgc
ctcaatccaatcatgcagcagatgcagaacctccagcaactccagaaccagaactttatc
aacgccgatctgagccccccggagctccagcagggtcccgtacccatccgcaccatcctg
ccccaggaggcccagataatgccggccgcaatgggcgcccagttcctcacgccaccctct
cagcacagctactcgggccccgtggacggcaacacacccagccatcaggtccaggtgccg
gaccacccctttctgacgccttcgccgggctcacccgaccagtggtccagctcctcgccg
cactccaacatgtcggactggtcagagggaatctccagtccacctactagcatgccggcc
cagatgggacacctggcagagcagttcaagtga
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