Staphylococcus pseudintermedius HKU10-03: SPSINT_1794
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Entry
SPSINT_1794 CDS
T01396
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Pathway
ssd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPSINT_1794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssd03021
]
SPSINT_1794
03400 DNA repair and recombination proteins [BR:
ssd03400
]
SPSINT_1794
Transcription machinery [BR:
ssd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SPSINT_1794
DNA repair and recombination proteins [BR:
ssd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SPSINT_1794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF676
Motif
Other DBs
NCBI-ProteinID:
ADV06322
LinkDB
All DBs
Position
complement(1868588..1869127)
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AA seq
179 aa
AA seq
DB search
MKLQDYTQEMVDEKSFIDMAYTLLSEQNATMNLYDIIDEFKRIGHYEDAQIEDRIVQFYT
DLNTDGRFLSVGDNVWGLRDWYSVDDIEEKIAPTIQKFDILDEDDEEDKNLTLLGEDDLD
GDDNIPNRTDDQEDLDDPEDERVEDEIEESDLVVEEDEEDIDETYDEDDELEEEEEETF
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacaagattacacacaagaaatggttgatgaaaaatcatttattgatatggct
tatacgcttttaagtgaacaaaatgcaacgatgaacctttatgatattattgatgagttt
aaacgtattggtcattacgaagatgcacaaattgaagaccgtatcgttcaattctacaca
gatttaaatacggatggtcgttttttaagtgtaggtgataacgtttggggacttcgcgat
tggtattcagtagacgatattgaagaaaaaatcgcaccaaccattcaaaaattcgatatt
cttgatgaagacgatgaagaagataaaaacttaacattattaggtgaagatgatttagat
ggcgatgacaacattccaaatcgtactgatgatcaagaagatttagatgatcctgaagat
gaacgtgttgaagatgaaattgaagagtcagacctcgtagttgaagaagacgaagaagac
atcgatgaaacatacgatgaagacgatgaacttgaagaagaggaagaagaaacattttaa
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