Shewanella sediminis: Ssed_0438
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Entry
Ssed_0438 CDS
T00596
Name
(GenBank) aconitate hydratase
KO
K01682
aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
sse
Shewanella sediminis
Pathway
sse00020
Citrate cycle (TCA cycle)
sse00630
Glyoxylate and dicarboxylate metabolism
sse00640
Propanoate metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01120
Microbial metabolism in diverse environments
sse01200
Carbon metabolism
sse01210
2-Oxocarboxylic acid metabolism
sse01230
Biosynthesis of amino acids
Module
sse_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sse_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
sse_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ssed_0438
00630 Glyoxylate and dicarboxylate metabolism
Ssed_0438
00640 Propanoate metabolism
Ssed_0438
Enzymes [BR:
sse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
Ssed_0438
4.2.1.99 2-methylisocitrate dehydratase
Ssed_0438
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_2_N
Aconitase_B_N
Aconitase
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
ABV35051
UniProt:
A8FQC8
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Position
540214..542811
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AA seq
865 aa
AA seq
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MLEAYRKHVEERASEGVVPKPLDAHQVAELVELVKNPPAGEEEFILDLLENRIPPGVDEA
AYVKAGFLDAVAKGEAKSSILSSARAVELLGTMLGGYNIQPLIAQLDVAEQAPLAVTALS
KTLLMFDAFHDVAEKMQAGNEFAKQVVHSWAEAQWFLNRPKLEEKISLTVFKVSGETNTD
DLSPAPDAWSRPDIPLHALAMLKNTREGIVPDEAGVIGPIKEIDQLKTKGFPLVYVGDVV
GTGSSRKSATNSVLWFMGDDIPNVPNKRAGGFCLGGKIAPIFFNTMEDAGALPIELDVSK
MNMGDVIDIYPYQGVVKRHDSDEVISEFALKTDVLMDEVRAGGRIPLIIGRGLTARAREV
LKLEASTVFVLPQDVADTGKGYTLAQKMVGKACGVTGIRPGQYCEPKMTSVGSQDTTGPM
TRDELKDLACLGFSADLTMQSFCHTAAYPKPVDVNTHHTLPDFIMNRGGVSLRPGDGVIH
SWLNRMLLPDTVGTGGDSHTRFPLGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGEM
QPGITLRDLVHAIPHKAIELGLLTVEKQGKINFFSGRVLEIEGLESLKVEQAFELSDASA
ERSAAGCSIKLDKEPVIEYLNSNIVMLKWMIAEGYGDRRTIERRIIAMQEWLENPELMEA
DSDAEYAAVIEIDLNDIKEPILCAPNDPDDAVLLSEVKDTKIDEVFVGSCMTNIGHFRAT
GKMLDKFATTLPTRLWITPPTKMDRDQLTEEGYYAIFGRVGARVEIPGCSLCMGNQARVA
DGATVVSTSTRNFPNRLGTGANVYLASAELAAVAALLGRLPSSDEYQEYAKQLDATAADT
YRYLNFDKMSSYTEKAGEVIFQSAV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
gtgctagaagcatatcgtaaacacgtcgaagagcgtgcttcagagggcgtagtccctaag
ccactagatgcccaccaagtcgccgaactcgttgagctggttaagaacccacctgcagga
gaagaggagtttatcctggacctgctggaaaatagaattccaccaggtgtcgatgaagcc
gcctatgttaaagctggtttcctggatgctgtcgccaaaggcgaagctaagtcatctatt
ctgtcatcggctcgcgccgttgaactgcttggcaccatgctgggcggctataatattcaa
ccgctgatcgctcagcttgatgttgctgagcaggcgcctttagccgttacagccctatct
aaaactctgttgatgtttgatgctttccacgatgtagctgagaagatgcaagccggtaat
gagtttgccaagcaggttgttcactcttgggctgaggcgcagtggtttcttaaccgccct
aagcttgaagagaagatctctctgacggtatttaaagtatcaggtgagacaaacacagat
gatttgtctccagctcccgatgcgtggtcacgcccggatatcccactgcacgctttagct
atgctaaaaaatacccgtgaaggtattgtgcccgatgaggccggtgtgatcggtccaatt
aaagaaattgatcagcttaaaactaagggcttcccattagtttatgttggtgatgttgtc
ggtacaggttcttcacgtaaatctgcgactaactcggtgctttggttcatgggtgatgat
atccctaatgtgccaaacaagcgtgctggcggtttctgtctgggcggtaagatcgcacca
atcttcttcaatacgatggaagatgccggtgcattgcctatcgaactcgacgttagcaag
atgaacatgggcgatgttatcgacatctacccgtatcagggggtcgttaagcgtcatgac
agcgatgaggttatctctgagttcgctctaaaaactgacgtgttaatggatgaagttcgt
gctggtggtcgtattccattgattatcggtcgtggcctgacggctcgtgcccgtgaagtg
ttaaagctcgaagcatcaacagttttcgtattaccacaagatgtggccgatacaggcaaa
ggttatacccttgctcagaagatggttggtaaagcttgtggcgttaccggtatccgtcct
ggtcaatattgtgagcctaagatgacctcggttggttcgcaagatactaccggtcctatg
actcgtgatgagcttaaagatcttgcatgtcttggcttcagtgccgacttgactatgcag
tctttctgtcacacagcggcttatcctaagccggttgatgtgaatacgcaccacacgcta
cctgatttcatcatgaatcgtggtggtgtatctttgcgtcctggtgatggtgttatccac
tcttggttaaaccgtatgctactgcctgatactgtcggtaccggtggtgattcacatact
cgtttcccgttaggtatttcgttcccggcaggttcgggcctggtggccttcgccgccgcg
actggcgtaatgccgctcgatatgcctgaatcagtcttggttcgttttaaaggtgaaatg
cagccaggtatcacgttacgtgatcttgtccatgcgattccgcataaagcgatcgagctg
ggtctgctaactgttgagaagcagggtaagattaactttttctctggccgagttcttgaa
attgaaggcttagaaagcttgaaggttgagcaggcatttgaattgtcagacgcttctgct
gagcgtagtgctgctggttgtagtattaagcttgataaagagcctgtcatcgaatatctg
aactctaacattgtgatgttgaagtggatgatagccgaaggttatggcgatcgtcgtact
atcgagcgtcgtattattgcgatgcaagagtggttagaaaacccagagttgatggaagct
gacagcgatgcagaatatgccgcggttatcgaaattgacttgaatgacattaaagagcca
atcctttgtgcccctaacgaccctgatgatgcagtactgctatcagaggttaaagacact
aagattgacgaagtattcgtgggttcttgcatgactaatatcggtcatttccgtgctacg
ggtaagatgctggataagtttgctacaacgctaccgacgcgtctgtggatcacgcctcca
actaagatggatcgtgatcagcttaccgaagagggttattacgctatcttcggccgcgtt
ggtgcgcgtgttgagatccctggatgttctctctgtatgggtaaccaggctcgtgttgcc
gatggtgcgacagtggtttcaacttcgactcgtaacttccccaaccgtctgggtacaggt
gctaatgtttatttggcatcggctgaattggctgcggttgctgcactcctaggtcgtctg
ccaagttctgatgagtatcaggagtatgctaagcagttagatgcaacggctgccgatacc
tatcgttatctgaacttcgataagatgagttcttatactgaaaaagcgggcgaagttatc
ttccagtctgcggtatag
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