Shewanella sediminis: Ssed_3378
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Entry
Ssed_3378 CDS
T00596
Name
(GenBank) Deoxyribose-phosphate aldolase
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
sse
Shewanella sediminis
Pathway
sse00030
Pentose phosphate pathway
sse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Ssed_3378
Enzymes [BR:
sse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
Ssed_3378
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoC
Motif
Other DBs
NCBI-ProteinID:
ABV37982
UniProt:
A8FYQ9
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All DBs
Position
complement(4114973..4115746)
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AA seq
257 aa
AA seq
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MSDLKKAAQKAIELMDLTTLNDDDTDQKVIELCHKAKTPAGNTAAICIYPRFIPIARKTL
NEMGCESIRIATVTNFPHGNDDIAIAVLETRAAVAYGADEVDVVFPYRALMAGNETVGFE
LVKACKEACGEGVLLKVIIESGVLQDPALIRKASELCIDAGADFIKTSTGKVPVNATIEA
AEIMMTVISEKNTKVGFKPAGGVRDAAAAGEFLGLAARLLGDEWATPRTFRFGASSLLIN
LLHTLELGEAAKGPQGY
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttaaaaaaagcagcacaaaaagccattgaattgatggatctgaccaccttg
aacgatgatgataccgatcagaaggtgattgaactttgtcataaggctaagacgcctgcc
ggcaacactgcagcaatctgtatctatcctcgcttcattccaatcgcacgcaagacactg
aacgagatgggctgcgaaagcatccgcatcgcgacagtgactaacttccctcacggtaac
gatgatatcgctatcgcggtactagagactcgtgctgccgttgcttacggcgcagacgaa
gtcgatgtggttttcccataccgtgcactgatggctggtaacgagactgttggtttcgag
ctggttaaagcctgtaaagaagcgtgtggcgaaggtgtactgcttaaggtgatcatcgag
tctggcgtactgcaagaccctgcacttattcgtaaggcttctgagttatgtatcgatgca
ggtgctgacttcattaagacttctaccggtaaagttccggttaatgcaaccatcgaagct
gctgaaatcatgatgacagtgatcagcgaaaagaacaccaaagtcggcttcaagcctgct
ggcggcgttcgtgatgcagctgctgccggtgagttcttaggacttgctgcgcgtctttta
ggtgatgagtgggcgacgccacgcaccttccgttttggcgcgtctagcttgctaataaac
cttctgcataccttggaactaggtgaagccgctaagggtcctcaaggttactaa
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