Shewanella sediminis: Ssed_4105
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Entry
Ssed_4105 CDS
T00596
Name
(GenBank) Porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
sse
Shewanella sediminis
Pathway
sse00860
Porphyrin metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01120
Microbial metabolism in diverse environments
sse01240
Biosynthesis of cofactors
Module
sse_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Ssed_4105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sse04147
]
Ssed_4105
Enzymes [BR:
sse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Ssed_4105
Exosome [BR:
sse04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Ssed_4105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
CBP_BcsN
Motif
Other DBs
NCBI-ProteinID:
ABV38709
UniProt:
A8G0T6
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All DBs
Position
5020015..5021031
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AA seq
338 aa
AA seq
DB search
MNIITSAFPQRRMRRMRKHDFSRRLMAENQLSVNDLIYPMFVLEGNNRTEEIASMPGVER
YSIDLLLKEAEEIVKLGIPLIALFPVTPSEKKTLMAEEAYNADALAQRAVRALKEAFPEL
GVMTDVALDPFTTHGQDGIIDEDGYILNDITTEILVKQALSHAEAGADIVAPSDMMDGRI
GAIRQALEEAGHVNTQIMAYSAKYSSNYYGPFRDAVGSAGNLKGGNKHSYQMDPANSDEA
LHEVALDIQEGADMVMVKPGMPYLDIVTRVKRELAVPTFAYQVSGEYAMHMAAIENGWLA
EKAIVMESLLCFKRAGANGVLTYFAKRAAQWLKEDEVK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattattactagtgctttccctcagcgtagaatgcgccgcatgcgtaaacatgac
tttagccgtcgtttaatggctgaaaaccagctttcggtgaatgatttaatctaccctatg
tttgtattagagggtaacaatcgtaccgaagagatcgcttctatgccgggggttgaacgc
tactctatcgatcttttgcttaaagaagccgaagagatcgtcaagctgggaatcccgctg
attgcacttttcccagtgactccgagtgaaaagaaaaccctcatggccgaagaggcttat
aacgccgatgctctggcgcaacgtgcggttcgtgcactcaaggaagccttccctgagctg
ggtgtcatgactgacgtcgccttagacccattcacgactcatggtcaagatggcatcatc
gacgaagatggctatattcttaatgacatcactaccgaaatattagttaagcaggcgctg
tctcatgccgaagcgggtgccgacattgttgccccatccgatatgatggatggtcgtatc
ggtgcgattcgccaggcactcgaagaagccggtcatgtgaacactcagatcatggcatac
tcggctaagtattcatcaaactattacggaccatttcgtgatgccgtcggctctgcgggt
aacctaaagggtggtaataaacacagctaccagatggatccggcaaatagcgatgaggct
ttacatgaggttgccctcgatattcaggaaggtgcagatatggtcatggttaagcctggc
atgccttacctcgatatcgtaacccgggttaaacgagagcttgccgtaccaacattcgcc
tatcaggtcagtggtgaatatgccatgcatatggctgccatcgagaatggctggttggcc
gaaaaagccatcgttatggagtcgctactctgctttaagcgtgccggcgcaaatggcgtc
ctgacttacttcgctaagcgagctgctcagtggctaaaagaggatgaagtgaagtaa
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