Sulfurimonas sediminis: FJR45_03240
Help
Entry
FJR45_03240 CDS
T07337
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ssei
Sulfurimonas sediminis
Pathway
ssei00190
Oxidative phosphorylation
ssei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssei00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
FJR45_03240
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR45_03240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssei03019
]
FJR45_03240
Enzymes [BR:
ssei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
FJR45_03240
Messenger RNA biogenesis [BR:
ssei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FJR45_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QOP43018
UniProt:
A0A7M1B2T2
LinkDB
All DBs
Position
complement(580391..582490)
Genome browser
AA seq
699 aa
AA seq
DB search
MINLKNPNLYLNRELSWLQFNTRVLKQAQDESLPLLERLKFLAIYGTNLDEFYMIRVAGL
KKLFAAGIIVSGADRLTPLQQLREIRNYLHQEQQVVEHCRSEIFKKLEPHGISVKTYDEV
NNQDKHKLNQYFNENIYPVIIPIAIDATHPFPHLNNLSFGLIVKLRDMDNENIERFGIIR
VPRVLNRFVELGNGTYVPIESVVEKHVDELFPGYELIKYAPFRVTRNADIAIEEEEADDF
MEILEEGLKLRRKGEMVRLEVGSNADDEIINFFNRHAHIYKDDIYRYHTFLNLSSLWQIV
SNKNFAHLLAPAFQPKNLPPFENNEDIFSILEKQDVLMYHPYQSFDPVVNLIQYAAKDPD
VVSIKMTLYRSGTKSPIVKSLMDASESGKQVTVMVELKARFDEENNLIWAKALEKSGAHV
IYGIQGFKVHAKAALITRRKNGKLKQYAHLGTGNYNPSTAKIYTDMSYMTSKDTITNDLT
RFFHFLTGFSKKGKLNELYMSPSQIKPKLLSLIHNETRQGKNGHIIAKINSLVDDDVIRA
LYKASIAGVKVELIVRGICCLKPGIKDVSENIRVVSILGKYLEHARTFYFKNDASKVYIS
SADWMPRNLVRRIELLTAIKDEDAKKKIIQILKLQCSDNALAHELQSDGSYIKIKPKEGQ
KIINNHKLLEDYVNRIAKATKKETSTYVQQLVNRLFIES
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgataaaccttaaaaatcccaatctttatttaaaccgtgagctttcatggttacagttt
aacacaagagtcctcaaacaggcgcaggatgaatctttgcctctgcttgaacgtctcaaa
tttcttgccatttacgggacaaatctggatgagttctatatgattcgcgtggcaggttta
aaaaaactttttgctgcgggcattatcgtctcaggggctgacagacttaccccattgcag
cagcttcgtgaaataagaaactatctgcaccaggaacaacaggttgtcgagcactgcaga
agtgaaatatttaaaaaacttgagcctcatggtatcagtgtaaaaacatatgatgaagtg
aacaatcaggacaaacataaactcaaccagtatttcaatgaaaacatctacccggtaatt
attcccattgccatagatgccacacacccttttccgcaccttaacaacctgagtttcgga
cttatcgtaaagcttcgcgatatggacaacgaaaacatagaacgctttggaattatacgt
gtgccccgtgttttaaacagatttgtagagcttggaaacggaacctatgtgcctatagaa
agtgttgtggaaaaacatgttgatgaactgtttccaggctatgagcttatcaaatatgcc
ccttttcgtgtgacaagaaatgctgatattgccatagaggaagaggaagctgatgacttt
atggagattcttgaagagggcttaaaacttcgccgtaaaggagaaatggtccgcctcgaa
gtcggttccaatgccgatgatgaaatcattaacttttttaaccgtcatgcacatatctat
aaagatgacatttacagataccatacttttttaaacctttcaagtctttggcagatagta
tccaacaaaaattttgcacatcttttggcaccggcctttcaaccaaaaaacctgccgcct
tttgaaaacaatgaagatattttctctattttggaaaagcaggatgtcttgatgtatcat
ccgtatcaaagctttgaccctgtggtaaatctcattcagtatgcagcaaaagatcctgat
gttgtctctataaaaatgacactctaccgttcagggacaaaatcacctattgtcaaatct
ttgatggatgccagcgaatcggggaaacaggtcacggtcatggttgaactcaaagcacgt
tttgatgaagaaaacaatcttatctgggcaaaagcgcttgagaaatcaggagcccatgtt
atttacggtattcagggttttaaggtccatgcaaaagccgctttgattacaagaagaaaa
aacggaaaactcaaacagtatgcccatttgggcacaggaaactataacccttccactgca
aaaatatatactgatatgagctatatgaccagcaaggacacaatcaccaatgacttaaca
cgctttttccactttttgacaggtttcagcaaaaaaggaaaactcaatgagttgtatatg
tctccttcacaaatcaaacccaaactcctctcactcattcacaatgaaacaagacagggg
aaaaacggacacatcattgcaaagataaactcacttgtcgacgatgatgtcatcagagca
ctttataaagcttcaatagccggtgtaaaagttgagcttattgtacgtggtatctgctgt
ttgaagcccggtatcaaagatgtaagtgaaaatataagagttgtttccattttgggaaaa
tatctcgagcatgcccgtactttttattttaaaaatgatgcatcaaaagtctatatctca
agtgcagactggatgcctcgaaatcttgtgcggcgtatagagcttttaactgctatcaaa
gatgaagatgccaaaaagaaaattatacagattcttaaactgcaatgctccgacaatgca
cttgcacatgaactgcaaagtgacggatcctatataaaaatcaaacccaaagaggggcaa
aaaattatcaacaaccacaaacttcttgaagactatgtcaaccgtattgcaaaagcaacc
aaaaaagagacctctacctatgtgcagcaactggtaaaccgtctcttcatagaaagttaa
DBGET
integrated database retrieval system
