Shewanella sedimentimangrovi: JYB85_03600
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Entry
JYB85_03600 CDS
T07846
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00250
Alanine, aspartate and glutamate metabolism
ssem00280
Valine, leucine and isoleucine degradation
ssem00310
Lysine degradation
ssem00410
beta-Alanine metabolism
ssem00640
Propanoate metabolism
ssem00650
Butanoate metabolism
ssem01100
Metabolic pathways
ssem01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JYB85_03600 (gabT)
00650 Butanoate metabolism
JYB85_03600 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JYB85_03600 (gabT)
00280 Valine, leucine and isoleucine degradation
JYB85_03600 (gabT)
00310 Lysine degradation
JYB85_03600 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JYB85_03600 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssem01007
]
JYB85_03600 (gabT)
Enzymes [BR:
ssem01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
JYB85_03600 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
JYB85_03600 (gabT)
2.6.1.48 5-aminovalerate transaminase
JYB85_03600 (gabT)
Amino acid related enzymes [BR:
ssem01007
]
Aminotransferase (transaminase)
Class III
JYB85_03600 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
QSX37938
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All DBs
Position
871175..872455
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AA seq
426 aa
AA seq
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MTKNNASLMARRQAAVAAGVGQIHPVFAERAENARVWDVEGKEYLDFAGGIAVLNTGHLH
PKVKAAVAAQLEDFSHTCFMVLGYESYVALCEKLNNLVPGNFAKKTALFNSGSEAVENAI
KVARAATGRAGVIAFTSGYHGRTMAALALTGKVAPYSKGMGLMQANVFRARFPSALHGIS
EDDAMDSIAQIFRNDAEPADIAAIILEPVQGEGGFYVASPGFMQRLRQLCDREGIMLIAD
EVQTGAGRTGTFFAMEQMGVAADITCFAKSIAGGFPLSGITGKAEIMDAIGPGGLGGTYG
GNPLACAAALAVIEVFEQEKLLARSQAIGQQLTRGLRQLQHQYAQIAEVRGLGAMVAMEL
MEDGAPAPQHCAPILAAARERGLILLSCGTFGNVLRILVPLTASDEDISEGMAILGESLK
AVLGGG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaacaatgcttccctgatggcaagacgccaggcggccgtggccgccggtgtt
ggccaaattcaccccgtgtttgccgagcgggccgaaaatgcccgggtgtgggatgtggaa
ggcaaggagtatctggattttgccggcggcattgccgtgctcaacaccgggcatctgcat
cccaaggtcaaggccgcggtggcggcccagctggaggatttctcccacacctgttttatg
gtgctgggatacgagagttatgtggccctgtgtgaaaagctcaacaacctggtgccgggg
aactttgccaagaagacggccctgttcaacagcggttccgaggcggttgagaacgccatc
aaggtggcccgcgccgccacgggccgggccggggtcatcgcctttacctcggggtaccat
ggccgcaccatggcggcacttgccctgaccggcaaggtggcgccctacagcaagggcatg
gggctgatgcaggccaatgtattccgggcacgttttcccagcgccctgcacgggatcagc
gaggatgacgccatggactccatagcgcagatcttccgtaacgatgccgagcccgccgat
atcgccgccatcatacttgagccggtgcagggggagggcggtttctatgtcgccagcccc
ggctttatgcagcgcctgcggcagctgtgcgatcgcgaaggcataatgctgatagccgat
gaggtgcagaccggcgccggtcgtaccggcacctttttcgccatggagcaaatgggcgtg
gccgccgacatcacctgttttgccaagtccatcgccggtggcttcccactgtcggggatc
accggcaaggcggagatcatggacgccataggcccgggaggactgggtggcacctacggc
ggtaatccgctggcttgcgctgcggccctggcggtgatcgaggtgtttgagcaggaaaaa
ctgctggcccgctcccaggccataggccagcagctgacccgcgggctgcggcagttacaa
caccaatacgcgcaaatcgccgaggtgcgcggtctcggggccatggtggccatggagctg
atggaagatggtgccccggcgccccagcactgcgcgcccatattggcggcggcgcgggag
cggggactgatcctgctgtcctgcggcacctttggcaatgtgctgcgtattctggtgccc
ctgaccgcctccgatgaggacatctccgaggggatggccatcctgggtgagtcgctcaag
gccgtgcttggcggcggctaa
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