Solea senegalensis (Senegalese sole): 122760043
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Entry
122760043 CDS
T07721
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122760043 (trpa1b)
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122760043 (trpa1b)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
DUF4449
FERM_C_FAK1
Motif
Other DBs
NCBI-GeneID:
122760043
NCBI-ProteinID:
XP_043871085
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Position
LG1:26619531..26637013
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AA seq
1125 aa
AA seq
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MHFNREVTRQNSCYTYVIEDDDPALASLNIFELAERGDLALLETLVRKSPNILSEKDECG
ASPLHHAAAGGHVTLIQFIITVVDSEELNSSDEQGSVPLHWAVERNKTESCRALMSLGAN
PNILNMALMSPLHLAVNRGHNNLVELLLSYNATDSNLEGDLGNTPVMLACSVNNCEALKI
LLGHGARLCHQNKLGHFPIHAAAFAGAKRAMDVILKTGEEIGHSVTAHINYLDKSKSSPL
HLAVRGGNIDVISLCIASGAKIDQQQNDRSTPLHLACTQGATEVVKVMLSSIDHVEDIIN
LTDGACQTPLHRATVFDHTELAEYLISLGADLNSTDCKGNTPLLLATSCGAWKTVSLLLS
KGADVNVTDRGGCNFLHLAILQPKGLKNLPEEILQHSSVKALLSCEDNDGCTPLHYACRL
GIHDSVKNMLGLSGQLGLTYKSKDKKSALHFAAQYGRINTCQRILESITDSRLLNEGDER
GLTPLHLASRGGHAKVVELLLRKGALFHCDYKDWTCLHHAASEGYTQTMDIILSANPKLL
DKADEDGNTALHIAAKVGHVAAVKMMLSRGAMVLLNKNDTSFLHEAIHNVRKDVVNAVID
SNRFLSSRCSEAVTFFQPGSGQKCPIIDLIEFLPESYKHLLDHCVLESDDDQNSPEYHIE
YDFKWLQSPISLKKADLKFEYQPLAALNAMVTYNRLDLLNHPVSKKYLAMKWDAYGSKAH
MLNMFIYLLGLLPLTHLMVNLRPTFNITDTGEHSIVMKPVSFKEVDMEQSVFISFCMMMV
FVMNICCIGKELLQFSQQGWNYLKDSSNGSDWMSAVFSLLFIVPTMLNVNGSYHWQAGAL
AVLTSWVGFLLYLQRFEGIGIYVVMFGEILRTLFRVVLLFLYLLLAFALAFYALMLNQKE
FENLPLAVVQTFVMMVGEMNYQTNFLDPYLRNQLPFGPVTYYIFIQFVMLMPILLVNLMI
GLAVGDIAEVQRNAALKRIAMQIDLHTALEDRLPYWFMKRVDKASVTVYPNRKCSKHFIM
QLFSGKEEADQIWGHVKAKSQSCTMIENELKKQKNRMKEMSGVLEKQHSLLKLIIQKMEI
TSEADEYDGPTNVSSRWQSPIQAKSRGHGVSRWVPLMKAIENKRK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcaaccgggaggtgactcgacaaaacagctgttatacgtatgtgatagaagat
gacgatccagccctggccagcctaaatatattcgagttggcagagaggggcgacttggct
ctcttggagaccctggtgcggaagagccccaacatcctgagcgagaaagatgaatgcgga
gcaagtccccttcatcatgccgccgcagggggccatgtcaccctcatccaattcatcatc
actgtcgtagactccgaggagctgaacagctcggatgagcagggcagtgtccctctacac
tgggcggttgagaggaacaagacagagagctgcagggctcttatgagcctgggggctaac
ccaaacatcctgaacatggccctcatgtcccccctacacctggctgtcaaccgtgggcat
aacaatctggtggagctgctgctgtcttacaatgctacagacagtaatctggagggagac
cttgggaacaccccggtgatgctggcctgctccgtcaataactgtgaggctctaaagata
ctgttaggacacggagcgcggctctgccatcagaacaagctcggtcactttcccatccac
gcggctgccttcgcaggtgcaaagagagccatggatgtgatcctgaagacgggagaggag
attggccactccgttacagcccacatcaactatttagacaagtccaagagcagtcccctc
catctggctgtccgtggtgggaatattgatgtcatcagcctctgcatcgctagtggggcc
aaaattgaccagcaacagaatgacaggtccacacctctacatttggcctgcactcagggc
gccactgaggtggtcaaagtgatgctgtcctctattgaccacgtggaagacatcatcaat
ctgactgacggggcatgtcagacccctctacacagggctacagtatttgaccacacagag
ctggcagagtacctcatttcattgggtgcagacctgaacagcactgactgtaaaggaaat
actcctctgctgctggctacgagctgtggagcatggaaaacagtttctctgctgctgtca
aaaggggcagatgtaaatgtcacagacagagggggttgtaacttccttcacctggctatt
ctgcagcccaagggtctgaagaatctcccagaagaaatcctgcagcatagcagtgtgaaa
gcattgctgagctgtgaggataatgacggctgcaccccactccactacgcttgcagactg
ggtatccatgactcagtgaagaacatgctgggcctctcagggcaacttggcctcacatac
aagtctaaggacaagaagtcggccttgcactttgcagctcagtatgggcggatcaatacc
tgtcagcgaatactggagtccatcacagactcccgtctgctaaatgaaggcgatgagcga
ggcctgacaccacttcatttggcctcgagagggggacacgccaaggtggtggagttgttg
ttgcgcaagggagctctctttcactgcgattataaggactggacttgtctgcatcatgct
gcgtctgaaggatacacacagactatggacattatcctatcagccaatcccaagttactg
gataaagcggatgaggatgggaacactgcactccacatcgcagcgaaagtgggacatgtg
gccgcagtcaagatgatgttgtctcggggagcaatggtcctcttaaacaagaatgacacc
tcgtttctccacgaagcgatccacaacgtgaggaaagatgtggtcaatgctgtcattgac
agtaaccgttttttatcttccagatgttccgaggctgtgacatttttccaacctggctca
ggtcagaaatgccccattatagatttgattgagtttctgcctgagagttacaagcacctg
ttggaccactgcgttttggaatcggacgacgaccaaaacagtcctgagtatcatattgaa
tatgatttcaagtggctccaatctcccatttcgttgaagaaggcagatctcaaatttgaa
taccagccactggctgcactcaatgcgatggtgacgtacaaccggctcgatctactaaac
caccctgtttccaaaaagtacctggcaatgaagtgggatgcttatggaagcaaggctcat
atgttaaacatgtttatctacctgttagggctgctgcccctgactcacctgatggtgaat
ctacggcccacttttaacatcactgacacaggcgagcacagtatcgtcatgaagcccgta
tctttcaaagaggtagacatggagcaaagcgtgttcatatccttctgcatgatgatggtc
ttcgtcatgaacatctgttgcattgggaaggagttgctgcagttctcgcagcagggttgg
aattacttgaaggattctagtaacggctctgactggatgtcagccgtcttctctctgctg
ttcatcgtccctaccatgctcaatgtcaatggttcttatcactggcaagcgggggcactg
gcagttttaacctcatgggttggatttctcctttatctccagaggttcgagggaattggc
atctatgtggtgatgtttggggagatcctacggacactgttccgtgttgtgttgctgttc
ctttacctgctgttagcattcgcgttggccttctatgctttgatgctcaaccagaaagag
tttgaaaacttgccactcgcagtggtgcagacctttgtgatgatggtcggagaaatgaac
taccagaccaacttcctggatccttatctgcgcaaccagcttccctttggtcccgtgact
tattacattttcatacagtttgtgatgcttatgccaatactgctcgtcaacctgatgatt
ggtttggcagtcggagacattgctgaagtccaaagaaatgctgcgctgaaaagaatagcc
atgcagattgaccttcacactgctctggaagatcggctcccgtactggttcatgaaacgc
gtggacaaagcctccgtaacagtctaccccaatcgcaagtgctcaaagcactttatcatg
cagttgttttcgggcaaggaggaagcagatcaaatctggggtcatgtcaaggctaaatca
caaagctgcactatgatagagaatgagctcaagaagcagaagaacaggatgaaagagatg
tcaggcgtcctggagaagcagcacagcctcctgaagctcatcatccagaagatggagatc
acctcggaggctgatgagtatgacggccccacgaacgtcagcagcaggtggcagagtcca
atccaggctaagtcgagaggacacggtgtgtctcggtgggtcccgctgatgaaagccata
gagaacaaaaggaaataa
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