Solea senegalensis (Senegalese sole): 122778729
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Entry
122778729 CDS
T07721
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122778729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122778729
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122778729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
DUF1192
GAS
Motif
Other DBs
NCBI-GeneID:
122778729
NCBI-ProteinID:
XP_043896761
LinkDB
All DBs
Position
LG1:2370926..2392271
Genome browser
AA seq
2509 aa
AA seq
DB search
MAAVLLQALERTELNKLPKGVQNKLEKFVTELQNANEALKTQHERFKADSEQQYFDIEKR
LLESQEQILSATKDLQLVKEENKKLNDELNTLKGIEGETPQDKTPQQQTKTKHEIEAERR
ELARLLEKRTQEVENLTEDVNRLSEKLTETNKLKVELQLKLDDVQSSEASVQHREKRMEQ
EKELLEKKIEWLTAELKTKTDELLSTNRDKGKEILELQGNLKNSKEQVTELESQLTSLKE
TCESHSKRAQDLNNKLKQAKDEQSAMEEKYRNELNAHIKLSSLYKGSATDMEKKNQELSR
AVEELGKVVKEAGEANKALEKKVLEGDGIKIRLEAELKEKIKKMEKELENATMKAAGKRC
CAPSVTEEQLDKMCPSAASIAAIVKPGMKFFDLYNAYAECQTQLQLEKQETRRVSRVLDE
IVQEVESKAPVLKRQREEYESIQRSMASLCTKLEQARVEIHSLLKEKEEAKQLCDAMERE
KLKTERQLDDTSAQLCTLLVELEEARGNQVSKDSNSSADISSTSEVISPQQLSFRSVEEL
QRQNQSLLGRLRELEQEKATQQKQATSARVSELEASVDKLQKEVEQLREQRNQQKQLADS
SARQRDMYKALLTQSTGFSLPSQDSSPQPAAVRPSAPGTRSTPQRAAAAESAQTAQTKAA
LKQLSDAFSLYKKEKAENDRMLTETNDRLQRQITEFNASHAKLTSQLEFSNKRYEILQET
VSAYRREIAALQDRNQKMAAVVQRHEHSIHTMCQDLRQANEKLALEEVRVKNVTKERDIL
RQGESRLNREKEAMLAEQRNQKLLLTNLKTIQLTMERTETDTRQRLENKIERLEAELASM
KTKMDKEVAQRHTLGRTMDAQLLEAKKQLETQNVVLQKTRDVLRSSEQQVAALKAQLTPG
SSSDAANNSNNSTTPATRATPLRAPLRVRPQTPTAPAQQPSQTPTLQQSQSEKELTEVKG
LLRTAEERNDELAEQLKIANTNVEQYKTLVLTLEDSLKEEKEFRASLEIRLKESQEVQEQ
LEKRIVEVEKMGQQEQEERRKAREALEKQVYEVQRQLKSSQTEQQDALERAAASLTKEQK
ATQESLLQTKLAGEAQAKYERELMLHAADVEALQELKKKIQRDVAQKDEIEEKLNKTSLL
LQEKTAAWNTLEKQLKEDLSNQSRRAEELGKQNALLHQQMDEMATSSRQQQQQQQQMDLS
FSEEGKTTEQLLEILRFVRQEKEIALAQCEVSVGEAVRYKQRVEHQDRELKELQEALNAE
REKMQVTAKTMSQQEEQLKKMHSITALQETNKILKLDRDKLQQELLQAEARVKKLQSDIN
PLHHSLSALSEKNGGLQADKRLLEDDIKHWKNKAQQMMNQQKDGNVEERQKLNTEREAQQ
RRIAQLTEEIAKLKTELARSTASTNAAQSQVQGFRDSVAHLMSEKETLKKDLETKTNDIL
EKNKTITQVKKIGRRYKTQYEELKAQHDKLVTETATKTGGEAAPNTELQQELSKAQEELN
KSREELKTLREDIQKKQEATQKAQHELEEAQKETQKTKEKLQEVTNQMTQNQSQLTQIQA
QLSQTQTQLTQSQKELQQGKIHNQQVHNQLKAAQARQNQMQRELQQAKDALQQNITSQKE
LQQTQQTSQHSHNQEVNNLKTALSQVEGKVTELQGQLDNLQKTVGEREANIQRLQEQLTE
ANKANEASQAVQAKSSQAGDANTATDSNQEEVTKLKQELNESKNKEEQLKQQMADKEEKT
KKLFMGAKTKINQLVAAKDQLSKETEELKQSKEELEVRMNALKSQYEGRLLRLDRELREL
KETQTHSESREEPQDQSGPKVVDQPRSSDQRQISLKSPAQGSSLSEPPTANIRPTPSTPS
PSNKPSPSPGSKSTPRASIRPMLTPATVSIPTPTATVMPTTQTDSQEVLMSTGASVHSTT
SSLVSASTSITQPTSTQATAFVQPTQQQAASQDAGSSMEAERPSTSSSLIGIGSKRGRED
EEEDEEESRPESSLSSPSTKKTRLKPSIALQMEGDEEMEGELRDDGEQQDSPDDSQELPE
EGFTVLAEDDEDIDEEGVSQSVPSYQMSSQDSDLIRDVIVITDSESRESREGEDKQDEEE
EEEEEEDEEEEEEEDDDDEEEEDDEDEDDAGDSGMTGGDESNEKSREAEDEGEEDPSEAT
NTEEDVCGASSDSQHASEPPQSSSSSVPSESDSTREPAHLPPISSSVPSPSSSLTPHLPH
PRRPTHSLPPRLYIQPPAPELGPPHTQRQSSQLRRPSVGRGLQLTPGIGSTQHFFDDDDR
MVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLPPTSASHSDLGQLASQGG
LGMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESLPSDSGDNMASQSVPMVTAST
GIPAAASDDGDEVFVEQEGDGPGIESSLDNQADGESSGQQSDDASLPSTSQDPDTSSVPQ
RRTVNSQHLLSSLSTRGSRGGREVRMLTSRRGTFSRGGRGGAMGRGGVA
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaggctctggagcggacggagttgaacaaactccccaaagga
gtccagaacaagctggagaagtttgtgacggagctgcagaatgctaacgaggcgctaaag
acgcaacacgagcggttcaaagcagacagtgagcagcagtactttgacatcgagaagagg
ctgctggagagccaggaacagatcctgtctgccaccaaagacctgcagttagtaaaggag
gaaaataagaaactcaatgacgaactgaacactctgaaaggaatagagggtgagacacct
caagataaaacaccacaacagcaaacaaagaccaagcatgagattgaggcagagaggaga
gagctggcaaggttgctggaaaagagaacgcaggaggtggaaaacctaactgaggatgtg
aaccgtctaagtgaaaagctgacagagactaacaagttaaaggtggagctgcagttgaaa
ctggatgacgtacaatcatccgaggcctctgtgcagcaccgggagaagcgcatggagcag
gagaaagagttactcgagaagaaaattgagtggctcaccgctgaactgaagaccaaaaca
gatgagttgctgagcaccaacagggacaaaggcaaagagattctagagctgcaggggaac
ctgaagaacagcaaggagcaggtgacggagctagaaagtcagctcacgtctctgaaggaa
acctgtgaaagccacagtaaaagagctcaagacctcaacaacaaactcaaacaggctaaa
gacgagcagagtgcgatggaggagaaataccgcaatgagctcaacgctcatatcaagttg
tcttcactctataaggggtcagcaacagatatggagaaaaagaaccaagaactgagcaga
gcagtggaagagctcggcaaagtggttaaggaagctggggaagcaaataaagctctggag
aagaaggtgttggagggcgacggaattaagattcggctggaggctgagctcaaagagaaa
atcaagaaaatggagaaagagctggaaaacgccacaatgaaggctgctggcaaacgctgc
tgtgcaccttctgtgaccgaggagcagttggacaaaatgtgtccatcagcagcctccatt
gctgcgatagtgaagccgggcatgaagttctttgatctgtataatgcctatgcagagtgt
cagacacagcttcagctggagaaacaggagaccaggagagtgagcagggtgttggatgag
atcgtgcaggaggtcgagtccaaagcgcctgtccttaagcgccaacgagaggagtacgag
agcatccagagatccatggcctccctgtgcaccaaactggaacaggctcgagtggagatc
cacagtttgctgaaagagaaagaagaggccaagcagctctgtgatgctatggagagagag
aaactgaagacagagcgacagctcgatgacacgtctgcacagctgtgtacacttctggtg
gagctggaggaagccagaggtaaccaggtgtccaaggacagcaacagctctgcggacatt
tccagcacctctgaggtcatcagcccacaacagttgtctttccgcagtgtggaggagcta
cagaggcagaaccaaagcctactggggagactgagggagctggagcaggagaaggccact
cagcagaaacaggcaacatcagcacgtgtgtctgagttggaggccagtgtggacaaactt
cagaaggaggtggagcagctgagagaacagaggaaccagcagaaacagctggctgactcg
agtgccaggcagagagacatgtataaggctctgttgacacagagcactggcttcagcctt
ccttctcaagattcttcacctcaacctgcagctgttcgtccgtccgccccaggtactcgc
tctacgccacaaagagctgctgccgctgagtcagcacagactgcacagactaaagcagcg
ttaaagcagctcagtgatgccttcagtctgtataaaaaggagaaggcagagaacgacagg
atgttgactgaaacaaacgacaggctgcagagacagataacagaattcaatgccagccac
gccaagctgacctctcagctggagttcagcaacaagaggtatgaaatactccaggagact
gtgtccgcctaccgcagagagatcgccgctcttcaggaccggaaccaaaaaatggctgct
gtcgtccaacgacatgagcactcgattcacacaatgtgtcaggatctgcgacaggcgaat
gaaaaactggcactggaagaggtgcgtgtaaaaaatgtgacaaaagagagagacatttta
aggcaaggggagagtagactgaaccgagaaaaggaagccatgctggctgagcaacgtaac
cagaaactactgctcaccaacctcaagactatacagttgacaatggagcgtacggagacg
gatacacgccagcggcttgagaacaagatcgagcgtctggaggcagagctggcttccatg
aagactaagatggacaaggaagtagctcagagacatacccttggacgtactatggatgct
cagttgttggaagccaagaagcagctggagactcagaacgtcgtgctacagaagaccagg
gatgtgttacgtagttctgaacagcaggtggcagcgttgaaagcccagctgacccctggt
tcatcatctgatgctgccaacaactccaacaactccaccaccccagctacccgagctaca
ccacttagagctccactgagagtgcgccctcaaacaccaacagctccagcccagcagcca
agccaaacgcccactctgcagcagagccagtcagagaaggaactaacggaggtgaaaggt
cttctgcgaactgctgaggaacggaacgatgaactagcagagcagctgaagattgctaat
accaatgttgagcagtataaaactttggttctgaccctggaagatagtctgaaggaagaa
aaggagttccgtgcctccctggagatcagactgaaggagtcacaggaggtgcaggaacag
ctggagaagaggattgtggaggtggagaaaatggggcagcaggagcaggaggagaggagg
aaggcgagggaggccctggagaaacaagtgtatgaggtgcagcgtcagctgaagtccagt
cagactgaacagcaggatgcactggagagagcggctgcttctctcacaaaggagcagaag
gccactcaggagagtctgctgcagaccaagctggctggagaggcgcaggccaagtatgag
cgggagctcatgcttcatgctgctgatgtggaggctctgcaggagctgaagaaaaaaatc
caacgagatgtagctcagaaggatgagatagaggagaagctaaacaagacgtccctactc
ctgcaggagaaaactgcagcatggaacacattagagaaacagctaaaggaggacctgtcc
aatcagagtcgtcgcgctgaggagctgggcaagcagaacgctctcttgcaccagcagatg
gatgaaatggccaccagtagccgtcagcagcagcagcagcaacagcagatggacctgtcg
ttcagtgaggaaggaaagaccactgagcaattattagaaatactcaggtttgtgcggcag
gagaaagagatcgctctggctcaatgtgaggtgtcggtgggagaagctgttcgctacaaa
cagcgagtggaacaccaggacagagaactaaaggagctacaggaagctctgaatgctgag
agggagaaaatgcaggttacagctaagactatgtcgcagcaggaggaacagctgaagaag
atgcacagtatcactgctctacaggaaaccaacaagatactgaaactggacagagacaag
ctgcagcaggagctgcttcaagcggaggctagagtgaaaaagctccagtcggacatcaac
ccactgcatcactcgctgtctgcgctgtcagagaaaaatggcggccttcaggctgacaag
aggcttctggaggatgacatcaaacactggaagaacaaagcacagcaaatgatgaaccaa
cagaaagatggaaacgtggaggagaggcagaaactgaacacagagcgggaagctcagcag
agacgcatcgcacagctcactgaagagattgccaaactcaagactgaactggccagatcc
actgccagcacaaatgcagcacagtctcaagtgcaaggcttcagagactctgtggcacat
ctgatgtcggagaaagagactctgaaaaaagacctggaaacaaagaccaatgacattttg
gagaagaacaagaccatcacacaggtcaagaagatcggacgacgctacaagacccagtat
gaggagctgaaagcccagcatgacaagttggtcacagaaacggcaactaaaacaggaggt
gaggcagctccaaacacagagttgcagcaggagctgagtaaagcccaggaggagcttaac
aagtccagagaggagctgaaaaccctgagagaagacattcagaaaaaacaggaagctact
cagaaagcccagcatgagttggaagaggcccagaaggagacacagaagaccaaggagaaa
ttgcaagaggtcactaaccagatgacacagaaccagagccaactgacacagatccaggcc
cagttgtctcagactcagactcagctgacccagagtcagaaagagcttcagcaaggcaag
atccacaaccagcaggtacacaaccagctgaaagcagctcaggcccgtcagaaccagatg
cagagagagctccagcaggcgaaagacgcgctccaacagaacatcaccagtcagaaagag
ctgcagcagacacagcaaacgagtcaacacagccacaaccaggaagttaataatcttaag
actgctctgagccaagtggaggggaaggtgactgaactccagggacagctggacaacctg
cagaagacggttggtgagcgggaagcaaacatccagcgtttgcaggagcagctaactgaa
gctaacaaggctaatgaagctagtcaagctgtgcaggccaagagttcccaggctggtgac
gccaacactgctactgactctaaccaagaggaggtgactaaactcaaacaagagctcaac
gagagcaagaacaaagaagagcagctgaaacaacagatggctgacaaagaggaaaagacc
aaaaagctcttcatgggagccaagaccaaaatcaaccaactcgtggctgccaaagatcag
ctttctaaagagacagaggagctgaaacagagtaaagaggaactggaggtgagaatgaac
gccctcaagtctcagtacgaaggtagacttcttcgtctggacagagaactgagggagctg
aaagagacgcaaacacactccgagtccagagaggaaccacaggaccagagtggacctaag
gtggttgatcagcccagatcttcagaccagcgacagatatcactgaagagtccagctcaa
ggctccagtctgtctgagccacctactgcaaacatccgcccaactccaagtacgccatct
cctagcaacaagcccagcccctcccctggaagcaagtccacgccccgtgccagcatccgg
cctatgctcaccccagcaactgtctccatcccaacacctactgccactgtgatgccaacc
acacagactgacagccaagaggtgctaatgagtacaggagcgtcggtgcattccaccacc
tccagtctggtgagcgcatccacctccataactcagccaaccagcactcaagccacagcg
tttgtccaacccacccagcagcaggcggccagtcaggacgcaggatccagcatggaggca
gagcgaccctccacgtcctcctctctgattggaataggttcaaagcgaggcagagaagac
gaggaggaagacgaagaggagagcaggccagagagttccctctcatcaccgtctacgaag
aaaacgcggctgaaaccatcaatagcactgcagatggaaggtgatgaggagatggaaggt
gagctgagggatgacggggaacaacaggactcgccagatgacagtcaggagctcccagag
gaaggtttcaccgttttggctgaagacgacgaggacattgacgaagaaggcgtgtcccag
tctgtcccctcttaccagatgtcctctcaggactcggatttgatccgagacgtcattgtg
atcacagacagcgagagccgcgagagcagagagggagaggacaagcaggacgaggaagaa
gaagaagaggaggaggaagacgaggaggaggaggaggaggaggacgacgacgacgaggaa
gaggaggacgacgaagacgaggacgacgctggtgacagtggaatgacgggaggagacgag
agtaatgagaagagcagggaggctgaagatgaaggagaggaggacccatcagaggccaca
aacactgaggaggacgtgtgcggagcgtcttcggactcccagcatgcatctgagccgcca
cagagcagcagcagcagtgtcccgtcagagtccgactccaccagagaacccgcacacctc
ccccctatctcctcctctgtcccctccccctcctcctccctcactccccacctgccccat
ccccgcagacccacacactccctccctccaaggctctacatccaaccgccagctccagaa
ctgggacctccacacacacagagacagtcctctcagctgcgcaggccgtcggtcggacgt
ggacttcaactcactcctggaatcggcagcacgcaacatttctttgatgatgatgacagg
atggttcccagtactcccactctggtggttccacaccgcactgatggctttgctgaggct
atacattcccctcaggtggcgggtctgtccaccaggtttaggtttggacctccagaggac
ctgctgcctccgacttcagcatctcactctgacctaggacagctggcctctcaaggaggt
ttggggatgtatgagtctcctctgttcctggctgcacatgatgaagacggaggaggacga
agtgtccccaccacacctttacaagtagctgcaccagtgactgtcttcaccgagtcgctg
ccctcagacagtggcgacaacatggcctcccagtctgttcccatggtaacggcctccaca
gggatccctgctgctgcctcagacgatggagacgaagtctttgtggagcaggaaggagat
gggcctggtatcgagtcgtctttggacaaccaggcagacggggagtcgtcagggcagcag
agtgacgatgcatcactgccatctacaagccaagaccctgacaccagcagtgttcctcaa
cgacgcacggtgaacagccagcatctgctcagcagcctgtcgaccagaggaagtagagga
gggcgggaggtcaggatgttgaccagtcgcagaggaactttctctcggggaggaagagga
ggggccatgggcagagggggcgttgcctaa
DBGET
integrated database retrieval system