Solea senegalensis (Senegalese sole): 122782037
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Entry
122782037 CDS
T07721
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122782037 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122782037 (polr1b)
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122782037 (polr1b)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
122782037 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
122782037
NCBI-ProteinID:
XP_043902157
LinkDB
All DBs
Position
LG15:12717853..12724488
Genome browser
AA seq
1134 aa
AA seq
DB search
MDFSTKWRNLPQGPSLKNLTEGGFGVLKEAQHAAVQDLTKAHIESFDQAVTDGLSRVVQA
VPPLEFTVRNDKVSLSFVEVVIHNPVVSKGNICKEMRVFPAECRGRRCSYKGKIVADVSW
SINGVPKGIIKQFLGQVPIMVKSKLCNLHDMSPKELVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISIHCVKEEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKSCVSEMLRIVMEEGCPSRSKV
LNYLGERFRVKMNLPDWYTNEQCAHFLLDECVCIHLKSDKEKFYLLCLMTRKLFTFAKQE
CMEENPDSIMCQEVMTPGQLYLMFLKERLSAWLVSVKLSFDKRSVKMKEPCTSENIMKIF
NMGTDLTKPFEYLLATGNLSSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAETWLTTSISALLCSLGVT
PVDGSPGQAFADCYPVVLDGAVVGWLETELAPAVVDSLRRFKVLKEKNIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVRNLAFGEEELIGTFEQLYINVGILEDEIKPGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LAERVRGEESVVFGTKPDDPKVNNRLDADGLPHIGSTLTYGDPFYSYINLNTGQTHITYY
KSQETCVVDNVKVCSNDSGSGPFKRVCITTRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEQNSALEY
FGELLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCIDCGSLLSPLL
EKPPPYWSSMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcaactaagtggcgaaatttacctcaaggtccgagtctgaagaatctgact
gagggcggctttggtgtcctgaaagaggctcaacatgctgctgtgcaggatctgaccaaa
gctcacatcgagtcatttgaccaggctgtcaccgacggactcagccgcgttgttcaggcc
gtcccacccttggagttcactgtaagaaatgacaaagtcagcctttcctttgtggaggtc
gtgatccacaacccagttgtctccaaagggaacatttgcaaggaaatgagggtgtttcct
gcagagtgcagaggaagaagatgctcatacaaaggaaagattgtggctgacgttagctgg
tcgattaatggagttcccaaaggcatcatcaagcagtttttgggtcaggtgccaatcatg
gtaaagtccaagctttgtaacctccatgatatgtcccctaaggagcttgttgaacaccat
gaagaagcagaggaaatgggaggttatttcattgtgaatggaattgagaaggttatccga
atgctgatcatgccgaggaggaactatcccattgctatgtcgagacctaaatggaagagc
aggggccaaggatacactcagtatggtatttctatccactgtgtgaaggaagagcacaca
gccatcaacatgaacctacattatttagaaaatgggactgtgatgctgaactttatctat
cagaaagagcttttcttcctcccactaggctttgcactcaaggccttagtggacttcaca
gacttccagatctaccaggaactcatcaaaggccgcgaggataattccttctacaagagc
tgtgtatcagagatgcttcgcattgtcatggaggagggttgccccagccgtagcaaggtg
cttaattacctaggagagcgcttcagggttaaaatgaacctccctgattggtacacaaat
gagcagtgtgcccatttcctgctagatgagtgtgtctgtatccacctgaagtctgacaaa
gagaagttctacctgctctgtctgatgacaaggaagcttttcacatttgccaagcaggag
tgcatggaggagaaccccgacagcatcatgtgtcaggaagtcatgactcctggtcagctg
tacctcatgtttctgaaggaaagactgtctgcctggttagtgtctgtgaaactgtccttt
gacaagagatctgtcaaaatgaaggaaccatgtacttctgaaaatattatgaagatattc
aacatgggcaccgatttgaccaaaccctttgaatatcttctggctactggaaacctctcc
tccaagacaggtcttggcatgctgcagaacaccggcctgtgtgtcgtcgctgacaagctc
aacttcatccgttacttgtcccatttccgctgtgtgcacagaggagcagcgtttgccaaa
atgaggaccacctctgtccgtaagctgctgcctgaatcctggggcttcctgtgtcccgtc
cacaccccggacggagagccttgtgggctcatgaaccacatgacagccagctgtgagatt
gtggcagagacatggctcaccacatccatctctgctcttctctgttcccttggtgttact
ccagtggatggatctcctggtcaagcctttgcagactgttaccctgtggtccttgacggg
gctgttgtcggttggttggagaccgaattggccccagctgttgtagactcgctgcgcagg
ttcaaggtgctgaaagagaagaacattccaccctggactgagattgtcctggttcccaaa
acaggcaaagcaagtttgtacccaggcctgttcctcttcacaacaccctgtcgaatggtg
cggcccgtgcgcaatttggcttttggggaggaggagttgattggtacctttgaacaactt
tatatcaatgtgggcatcttggaggatgaaattaagccaggagtgaccacacaccaggaa
ctgtttcctcacagcatgctgagtgtcgtagctaacttcatcccttactcggaccacaac
cagagtcccaggaacatgtaccagtgtcagatgggtaagcagaccatgggtttccccttg
cactcgttcatggatcgctctgataacaagctgtaccggctccagacccctcagagtcca
ctggtcaggccttacatgtatgaccactacaatctggacaactacccgagcggcacaaat
gccatcgtggccgttatatcctacacaggctatgacatggaagatgcaatgattgtgaac
aagtcatcatgggagagaggctttgcccatggaagcatctacaagactgagctggttgat
ctggcagaaagggtgaggggagaagaaagtgtggtgtttgggaccaagccagatgatcct
aaggttaataacagactggacgcggatggactaccacacattggttcaacactgacgtat
ggagaccctttctatagctacatcaacctcaacactgggcagacccacatcacctactat
aagagtcaagagacctgtgtagtcgacaatgtaaaggtctgcagcaacgacagtggctca
ggcccttttaaacgtgtttgcattaccacacgagtaccgcgaaaccccactatcggtgac
aagtttgccagtcgccatggtcagaaaggcatcctgagccgcctgtggccggccgaggac
atgccctttacagaaagcggcatgagtcctgacatcctcttcaacccccacggcttcccc
tctcgtatgaccattgggatgctcattgagagcatggcaggcaagtctggtgccctgcac
ggcttgagccatgacgccacgcccttcaccttttctgagcagaactctgcactggaatac
tttggagagttgctccgggctggtggctacaactattatggcacggagcggctctacagt
ggcttgagtggtcaggagctcgaggccgacatctttatcggggttgtctactaccagcgg
ctacgtcacatggtctctgacaaatttcaggtgaggaccacaggtgctcgagacaaggtg
actaaccagccagtgggaggaaggaacatccagggaggcatccgttttggtgagatggag
cgagacgccctgctggcacatggctcgtccttccttcttcatgatcgcctctttaactgc
tcagaccgatcagtagctcaggtatgtattgactgcggcagcctcctctctcctctgtta
gagaaaccaccgccctactggtcatcaatgcgccaccgtaaaactgtgtgcaccctgtgt
ggaaaaagtgactcgattgactctgtgtctgttccttatgtcttccgctactttgtagca
gaacttgctgcgatgaacatcaaagtcaaactggatgtgaagtga
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