Solea senegalensis (Senegalese sole): 122785079
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Entry
122785079 CDS
T07721
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04010
MAPK signaling pathway
ssen04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122785079 (cacna1ha)
04020 Calcium signaling pathway
122785079 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122785079 (cacna1ha)
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122785079 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
122785079
NCBI-ProteinID:
XP_043906618
LinkDB
All DBs
Position
LG19:15247892..15293947
Genome browser
AA seq
2378 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVACQSEWCRILLALDDCIFAFFAVEMVIKMVALGIFGPNCY
LGDKWNQLDFVIVMAGMMEYSVDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLGENIITMYNLSLNSYYMSEEGEDS
PFICSAARENGMLRCHDVPPYSEGGAECSLEAPHQSSSALIGSLPVVGGASVNGCVNWNQ
YYNVCQPGSLNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILL
IIVGSFFMINLCLVVIATQFSETKQRENALMREQRARYMSNDSTLASYSEPGSCYEEMLR
YISHLYRKFTRRVQRIYSGWHSKRRKKVNPNGSGGGSNGGGNGHGHGSSRGCGGSGPNSA
FWLRPIHNLLQHHQHQHCRLSNGSQHAISVEGAEDMDREGGIGGGGGEELEMKSLPAQRG
STNENNSGSGGAGNSSVVTHGVGVLLGRLNGGMNYPTILPSFVCSYSSKTPPPHSQQCRP
SPEQHPPSHTASDHTETLNKLYQLMGQHSRQRLLYQLAGVVPSPLLLELLSCPLCARSLE
TLELELGDLEGGRGEADGLHDFPQVGHLRGGRGRGRRQGVVDYKNGVVRAWVGFREKLKR
IVESKYFNRGIMIAILVNTLSMGIEYHEQPEELTDVLEISNIVFTSMFVLEMGFMLLAFG
LFGYIRNPYNIFDSIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFLPALRRQLVVL
MKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSIQMKNGDTIPDRKNFDSLLWAIVTVF
QILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSE
SDDEKKSDNFEEDEKVEQLRDTELKMYSLMMTANGHVDPHSSMAPPIIMRTAATPMPTPK
SSLGPESFLGDELVRGEVGFSETISGHAESRHGSSASMDPLAYDQHSLCLSSPGRRSPLP
PRGSGSSWGSRRSSWNSLGRAPSLKRRDTSGERESLLSGEGGEEEDGGEDTLEPAGNNRL
QPGSLEVLQASTLMPSIIAEYGDCNGRTRTYDPNMNSTDSKDDSMPEDDIDDDSSFCLWI
KKELLNMKPRWCKEHEDWALYLFSPENQFRVWCQAVISHRLFDHIVLVFIFLNCITIALE
RPDIQLHSTERVFLSVSNYVFTVIFFAEMAIKVSALGFCFGKQSYLQSSWNVLDGLLVFV
SLVDILVSMAYTGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIV
LICCAFFIVFGILGVQLFKGKFYHCEGLDTKNVTNKSDCLQANYRWIRRKYNFDNLVQAL
MSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVV
VENFHKCRQDQEEEEARLREEKRLKMIEKKRRKAKQRPYYADYSPLRLSIHTLCTSHYLD
LFITFIICINVVTMSIEHYNQPQYLEEVLKYCNYVFTIIFVIEALLKLVAFGIHRFFKDR
WNQLDIAIVALSIMGITLEELKMSAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLD
TVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECNDNNPCEGLSRHATFENFGMAFLT
LFRVSTGDNWNGIMKDTLRECHPDDRHCLTYLPLVSPIYFVTFVLMAQFVLVNVVVAVLM
KHLEESNKEAKEDAEMDAEIALEMAMERERKLSIASNSSSVDGAYVGPCPQSPGQEEEVQ
YKDQDMLSSRKMSVSRMHSLPNDSYMFRPVRPASAPYPLEEVDPQQQHSGSVTSVHSQPC
ESRTLLQVPDVSPAHPRSPPTLTLPRIAPPTPSPSPRALRRQVAMKVDSVESHGCEQQER
PNPAHLSPPSTSTLPPHTSSPSPLPPPPPSSPSALSLPPSSPSAFPLPPASPTPLPVLLS
SPSPLPPPPSSPALLLPPPPPSPRVPLRPPSLRRPRPPSAAFFCDPADEEVYHITSSASH
RWKEEQGGGQESRGRASRSHSLSPYTSPYSLDSPTAPRPLPPTSSQSTLSLLQAGLKDRD
FTKGFSVDNQGFLDKPSSLSVGFPDEQRRHSIEVCLPQAAVTSDQRALAHDGHRLEKGGQ
AFPVRVQSVGGGHRKKKMSPPCISIHPPSEKEHAQMGSPPKLADCSTMLRRRTPSYDLTP
HTHSKTHTQDVSADSPMPSPMHTALTPILVPIQAHSPTHTLTPSQAPTPTHTPPFPSTPT
HPHIPISPNIFIQPHAPLLPSAMPFSQTRSLSPAARHSSLTGDCIPHSQFTFDQPQSRYV
SGLSAGLSDTDTATCSSPFDSRMGSGAGFSAKNRRTAQ
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcctgctcaactgtgtgactctggggatgttccagccctgcgaggatgtc
gcctgccagtcggagtggtgccgcatcctactggcactggacgactgcatctttgctttc
tttgctgtggaaatggtcatcaagatggtggccttgggaattttcggccccaattgttac
cttggtgacaagtggaaccagcttgactttgtcattgtcatggcagggatgatggagtac
tctgtggatggccataatgccagtctgtcagccatccgtaccgtccgtgtgctcaggcca
ctgcgagccatcaacagagttccaagtatgcggatcttggtaacactgctgttggacacc
ctgcccatgttaggaaatgtcctcctcctctgcttctttgtctttttcatctttggcatc
gtgggagtccagctgtgggcaggacttctgcgcaaccgctgcttcctgggagagaatatc
ataacaatgtacaacttgtccctgaattcttactacatgtctgaggagggtgaagacagt
ccattcatctgctcagccgcccgcgagaatgggatgctgcgctgccacgacgtgccgccc
tattccgagggcggcgccgagtgttcactggaagcgccgcatcaaagctcttcggctcta
attggatcgctccctgtggtgggaggggccagcgtaaatggctgcgttaactggaaccag
tactataatgtgtgtcaacctggaagcctcaaccctcacaaaggagctgttaactttgac
aatattggctacgcctggatagccatattccaggtcatcacactggaaggatgggtcgat
atcatgtactatgtcatggatgcacactccttctacaattttatatattttatactgctc
attattgtgggctctttcttcatgatcaacttgtgcctcgtggtcatcgccacccagttc
tcggagacaaagcagcgggaaaatgccctgatgagggagcagcgtgcgcgctacatgtcc
aacgactcaacgctcgccagttacagcgaaccgggctcctgctatgaagagatgctacgc
tacatcagtcacctttatcgcaagtttacacgccgggtgcagaggatatactctgggtgg
cacagtaaacgacgtaaaaaggtgaatcctaatggcagtggtggaggcagtaatggtggg
ggtaacggacatggccacggctccagcaggggctgtggaggttcaggcccaaatagtgca
ttttggctgaggccgatccataacctactgcagcaccatcagcaccagcactgtcgcctc
agcaacggcagccagcacgccattagtgtggaaggcgctgaggacatggacagagaggga
ggcattggaggaggaggaggagaggagctggagatgaagtcacttcctgcccagagagga
agtacaaatgagaataacagcggtagcgggggagccggcaactcatctgttgttacccat
ggcgtgggtgtactgctcgggcggctgaatggggggatgaactacccgaccatcctgcca
tcgtttgtgtgcagctacagcagtaagacgccaccacctcactcgcagcagtgcagaccc
agtccggagcagcacccaccaagtcacacagcgtctgaccacacagagacgctgaacaag
ctctaccaactcatgggacagcacagtcgccagcggctgctgtaccagctggccggcgtg
gtgcccagccctctgctcctggagctgctcagctgccctctatgtgcgcgcagccttgag
accttagagctggagctgggagaccttgagggtggcagaggagaggcggacggactgcac
gacttcccccaggtgggacatctgagaggtggaagaggtcgaggccgtcggcaaggggtg
gtggattataaaaacggagtggtccgcgcctgggtggggttcagggaaaaactgaagagg
attgtggagagcaaatactttaaccgggggatcatgatcgctatcctcgtcaatactctc
agcatggggatagagtaccacgagcagcctgaggagctgactgacgtgttggagatcagt
aacatcgtcttcaccagcatgtttgtcttggagatgggcttcatgctgctggctttcggc
ttgtttggatacatcaggaacccatacaacatttttgatagcatcattgttatcatcagt
gtgtgggagatcattggccagtcagacggcgggctctcagtgctgcggacgtttcgtctg
ctgcgggttctgaagctggttcgctttctgcccgcgctgaggagacagttggtggtgctg
atgaagaccatggacaacgtggccaccttctgcatgctgctcatgctttttatcttcacc
ttcagtatactgggcatgcatctgtttggctgtaaattcagcatccaaatgaagaatgga
gacacaattcctgaccgcaagaactttgactctttactctgggccattgttactgtgttt
cagattctgacccaggaggactggaacgtggtgctgtataacggcatggcttctacctct
ccgtgggcagcgctctactttgttgctctcatgacgtttggcaactatgtgcttttcaat
ttacttgtggccatcttggtcgagggcttccaggccgagggtgatgccaatcggtcggag
tcggacgatgagaagaaatcagacaactttgaggaggacgaaaaggtggaacagctcaga
gacactgagctaaagatgtactctctaatgatgacagccaacggtcacgtagacccacac
agctccatggctcctcctataatcatgcggacggcagcgacgcccatgcccactcctaag
agctccctgggccctgagtcgttccttggggacgagcttgtcagaggcgaggtgggcttt
tcggagacaataagtggtcacgcggagtctcgccatggaagttccgcctccatggatcct
ttagcctacgaccagcactctttgtgtctctcaagtcccggccggcgctcccctcttcct
ccccgtggctccggcagctcctggggaagtcgccgctcgagttggaacagcctgggaaga
gcgccgagcctgaaaaggcgcgacaccagcggagagagggagagccttctgtccggggag
ggaggggaagaggaagatggtggggaggatacactggagcctgctggaaacaacagattg
cagcctgggtccttggaggtgctacaggcgtccactctcatgccttccataatagctgag
tatggcgactgtaacgggaggaccaggacttacgaccccaacatgaactctacggacagc
aaggacgactccatgcccgaagatgacatagacgatgatagctccttttgcctctggatc
aagaaggagctccttaacatgaagccccgctggtgcaaagagcacgaagactgggcgctg
tatttgttctccccagaaaaccaattccgtgtttggtgccaagctgtaatctcccacaga
ctgttcgaccacatagttcttgttttcatcttcctcaactgcatcaccatcgctctggaa
agacctgacatccagctgcacagcacggagcgagtctttctgagtgtgtccaactacgtt
ttcactgtgatcttctttgcagaaatggccattaaggtttctgctctgggcttctgcttt
gggaagcagagctacctccagtccagctggaatgttctggacggtttgttggtctttgtg
tctctggtggatattctggtctctatggcttatactggaggaaacaggatcctgggcatc
ctcagagtcctgcgcctgctacgaacactacgcccactcagggttattagtcgagcccct
ggattgaagctggttgtggaaactctcattacttctctcagacccatcgggaacatcgtt
cttatctgctgcgccttcttcattgtctttggcatcctgggggttcagctattcaaaggg
aagttctaccattgtgaaggtctggacacgaaaaacgtcacaaacaagtccgactgtctg
caggcaaattaccgctggatacgaaggaagtacaactttgacaacctggtccaggcgctg
atgtcactgtttgtgctgtcgtgtaaggatggctgggtgaacatcatgtatgatgggctg
gatgcagtgggagtggaccagcagcctgtgaggaaccacaatccctggatgctgctctac
ttcatctccttcctgctcattgtcagcttcttcgtcctgaacatgttcgtcggtgtcgtg
gtggagaacttccacaagtgccggcaggaccaggaagaggaggaggctcgcttacgggag
gagaagaggctcaaaatgatagagaaaaagcgcaggaaggccaaacagagaccttactat
gcagactactctcctctgcgactgtccatccacacactgtgtaccagccactacctggac
ctcttcatcaccttcatcatctgcatcaacgtcgtcaccatgagcatcgagcactacaac
cagccgcagtatttagaggaggttctgaagtactgtaactacgtgtttaccatcatcttc
gtcatcgaggccctgctcaaacttgtggcctttggcatacacaggttcttcaaagacagg
tggaatcagctggatatagcgatcgtggccttgtccatcatgggcatcacactggaggag
ctgaaaatgagtgcagccctgcccataaacccgaccatcatcaggattatgagagtactc
cgaatagccagagtgctgaaacttcttaagatggccacggggatgagagctctgctggat
actgtcatgcaagcgctgccacaggtgggaaaccttggtctcctcttcatgctgctcttc
ttcatctatgctgcgctgggagtggagctctttggcaaactggagtgcaatgacaacaac
ccgtgtgagggcctgagtcgccatgcaacgtttgagaattttgggatggccttcctcacg
ctgtttcgagtgtccaccggagacaactggaatgggattatgaaagatactttaagggag
tgtcatccggacgaccgccactgtctcacctacctgcccctggtctcgccgatttacttt
gtcacctttgttctcatggcccagtttgtgctggtcaacgtggtggtggctgttttgatg
aaacatctggaggaaagcaacaaggaggctaaagaggatgcagagatggatgcagagatt
gccttggaaatggctatggagagggaacgcaaattaagcatcgcctctaacagcagctcg
gtggatggagcctatgttggaccatgtccacagtcacctggacaggaggaggaagtccaa
tacaaggaccaagacatgctgtcatcgaggaagatgtctgtatccaggatgcactcactg
cccaatgacagctacatgttccgacctgtgcgacccgccagcgctccctaccctttggag
gaggttgatccccagcaacagcattcaggctcggtgacctcggttcactcccagccgtgt
gagagtcgcactctgctgcaggtgccggacgtctcccctgctcaccctcggtctccgccc
accctgactctgccccgcattgccccgcccacaccaagtccttctccccgtgccctgcgc
agacaggtggcaatgaaggtggattcagtggagtcacacggttgtgaacagcaggagagg
ccgaaccccgcccatctgtctcccccgtccacttctaccctccctcctcatacctcctcc
ccatctccccttcctcctcctcctccctcgtccccttcggccctctcactcccacccagc
tctccctctgccttcccacttccgcccgcgtcccccactccgctgcctgttctgctgtct
tccccctctcccctccctccaccgccatcttcacctgcacttcttctgcctcctcctcct
ccctccccccgtgtccccctgcgcccgcccagccttcggcgacctagaccaccctctgct
gccttcttctgtgaccccgctgatgaggaggtgtaccacatcaccagctcagccagccac
aggtggaaagaagagcaaggaggtgggcaggagagccgagggagggccagtcgcagccac
tccctctccccttacacctccccgtactccctcgactcccctactgcccctcgcccactg
ccgccgacctcctctcagagcacactcagtctgcttcaggcaggattgaaggaccgcgac
ttcacgaaaggcttcagcgtcgacaaccagggcttcctggacaagccgtcgtcattgtct
gttgggtttcctgacgagcagcgtcgccactccattgaagtttgtctcccacaggccgcc
gtcacaagtgaccagcgggccttggcacacgacggccaccgattagaaaaaggaggccaa
gcatttcctgtaagggtgcagtcagtcggaggcggccacaggaagaagaagatgagtccg
ccctgcatatccattcaccctccctcagagaaggagcacgcccagatgggatcgccccca
aaactggccgactgcagcacgatgctgcgacgcaggacgccctcctacgacttgacccct
cacacgcactcgaaaacacacacccaagacgtctccgcggactcgccgatgccctccccg
atgcacacagcgctaacgcctatactcgtgccaatacaagcgcactcacccactcacaca
ctgacaccgtctcaggcgcccaccccgacacacactccgccgttcccgtccacacccaca
catccacacatccccatcagcccgaacatcttcatccagcctcatgcgccgcttctcccg
agcgctatgcctttctcacagacgcgctccctctcccctgcggcgaggcactcctcgctc
accggagactgcattcctcactcccagttcaccttcgaccagccacagtccagatacgtg
agcggcctgtcagctggactgtcagacacggacacggccacctgctcttcccctttcgac
agcaggatgggaagtggtgcaggattcagtgcaaagaacaggaggaccgcgcagtga
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integrated database retrieval system
