Saccharolobus shibatae: J5U23_03105
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Entry
J5U23_03105 CDS
T07357
Name
(GenBank) tRNA 4-thiouridine synthase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sshi
Saccharolobus shibatae
Pathway
sshi00730
Thiamine metabolism
sshi01100
Metabolic pathways
sshi01240
Biosynthesis of cofactors
sshi04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
J5U23_03105
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
J5U23_03105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sshi03016
]
J5U23_03105
Enzymes [BR:
sshi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
J5U23_03105
Transfer RNA biogenesis [BR:
sshi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
J5U23_03105
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
ATP_bind_3
Diphthami_syn_2
GutM
Motif
Other DBs
NCBI-ProteinID:
QXJ30209
UniProt:
A0A8F5GUP9
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All DBs
Position
2800231..2801352
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AA seq
373 aa
AA seq
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MLIIIRPSGEIALKSPRSRRNFEHTLANNIRSVIKEGKIWRSQGVLFLEVNDDNKNIEEL
SKVFGISSFSPVMSIKSYNNNLEDIISKAKEVFAEIVKGKIFAVRAKRIGSHNFTSLDVQ
RKVGEALYPFSRGVNLENPEVEVFIEIRNDIAYFYHKIIKGPKGLPVGVAGKTVVLFSGG
IDSPVATWMMMKRGSIPIILNFNLGGSVHRKFVLEELSVLRKWSGGHKLELFIVNGTDVL
IKLSQIEKRNRVVMLKRVMYKVAERLCNKANAKSITTGESLSQVSSQTMTNLYVTEYGIK
YPIFRPLIGFDKEEIVELARKIGTYEYSIKLPEYCAISAKARTSVELDEVLKDEEKLNID
YEKVLENSEVIEI
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgctaatcatcataagaccatcgggtgaaattgcgctaaaatctcccagatccagaaga
aattttgagcacacgctagccaataatataagaagtgttataaaagaagggaaaatatgg
agatcgcaaggcgtattatttttagaagttaacgatgacaataagaacatagaggagctt
agtaaggtatttgggatatcctccttttcaccagttatgtcgattaaatcttacaataat
aatttagaagatattattagcaaagctaaggaagtctttgctgaaatagtcaaaggtaag
atttttgctgtaagagctaaaagaataggttctcataattttaccagtttagatgtacaa
cggaaagttggtgaagctttatatccattttccagaggagttaatctagagaatcctgaa
gttgaggtattcatagaaattaggaatgatatagcgtatttttatcataaaattattaag
ggccctaaagggttgcctgttggagtagctggaaagaccgttgtgttgttttctggagga
attgattcgcccgtagccacatggatgatgatgaaaagaggttcaattcccattatttta
aacttcaatttaggaggaagcgtacataggaagtttgtattggaagaattaagtgtcctt
agaaaatggagcggaggacataaattagaactatttatcgtaaatggtacagacgtgtta
attaaattatcgcagattgagaaaagaaatcgtgtggtcatgttaaagcgagtaatgtat
aaggtagctgaaaggttatgtaataaggcaaacgctaaatcgataaccaccggggaatct
ctgtcacaagtctcatcacaaactatgactaatttatacgtaactgaatacgggataaaa
tatccaatttttagacctttaattggatttgataaagaagagattgtcgaacttgcaagg
aaaattggaacttatgaatattcaataaaactcccagaatattgtgcaatatcagctaaa
gctaggacgtctgtagaacttgatgaagtactaaaggatgaggagaaactaaacattgat
tacgagaaagtacttgaaaactcagaggtaattgaaatatga
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