Sphingomonas sinipercae: G7078_05460
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Entry
G7078_05460 CDS
T07461
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ssin
Sphingomonas sinipercae
Brite
KEGG Orthology (KO) [BR:
ssin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssin03009
]
G7078_05460 (rimO)
Enzymes [BR:
ssin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G7078_05460 (rimO)
Ribosome biogenesis [BR:
ssin03009
]
Prokaryotic type
ribosomal protein modification factors
G7078_05460 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Nudix_N
Motif
Other DBs
NCBI-ProteinID:
QIL02290
UniProt:
A0A6G7ZN01
LinkDB
All DBs
Position
complement(1044363..1045736)
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AA seq
457 aa
AA seq
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MKTTTIPRPPRVGLVSLGCPKNLVDSERIMTKLRSDGYDMSADYAGADVVLVNTCGFLDS
AKEESLSAIGEAIAENGRVVVTGCMGKEAEVIRERFPQVLAITGAHQYEQVVEAVHEAAP
PAASPFTDLVPESGLKLTPRHFSYLKISEGCNHRCAFCIIPQLRGDLASRRPDAILREAE
KLIAAGTRELLVISQDTSAYGLDLKHARYTWKGREVRAHMTDLARELGLLGAWVRLHYVY
PYPHVDSVIPLMAEGLVLPYLDIPFQHASPRVLRAMKRPANEAKVLQRLRAWRAEVPDMA
IRSSFVVGFPGETEEDFRYLLGWLEEAQLDRVGAFRFEPVEGASANALPDQVPEEVKTER
YERLMELSARISATKLAAKVGKTIDVIVDAVDVESGGATGRSKADAPEIDGEVLLRDAGH
LEPGDIVSVIVEDADDHDLYGALTAPAQAVPERSIAG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccacgaccattcctcggccgccccgcgtgggcctggtttcgctcggctgtccc
aagaacctggtcgacagcgaacggatcatgaccaagctgcgctcggacggctacgacatg
tcggccgactatgccggcgcggacgtggtgctggtcaacacctgcggctttctcgacagc
gccaaggaagaaagcctgtccgcgatcggcgaggcgattgccgaaaacggccgggtcgtc
gtcaccggctgcatgggcaaggaagccgaagtcatccgcgaacgcttcccgcaagtcctc
gcgattaccggcgcccatcaatatgagcaggtggtcgaagcggtgcatgaagccgcgccg
cccgccgcctcgcccttcaccgacctggtcccggaaagcggcctgaagctcacgccgcgg
cacttcagctacttgaagatctccgaaggctgcaaccatcgctgcgccttctgcatcatc
ccgcagcttcgcggcgacctcgccagccggcgccccgacgccatccttcgcgaagccgaa
aagcttatcgcggcgggcaccagggaattgctggtcatcagccaggacacgtccgcctac
gggctggacctcaaacacgcccgctacacctggaagggccgcgaagtgcgcgcccacatg
accgacctggcgcgcgaacttggcctgctcggcgcgtgggttcggcttcactacgtctat
ccctacccgcacgtggacagcgtcatcccgctcatggccgaggggcttgtccttccgtac
ctcgacattccgttccagcatgccagcccgcgcgttctgcgcgcgatgaagcggcccgcc
aacgaagcgaaggtgctccagcgcctgcgcgcctggcgcgccgaagtgccggacatggcg
atccgctcgtctttcgtggtcggcttcccgggcgagaccgaggaagactttcgctacctg
cttggctggcttgaagaagcccagctcgaccgggtcggcgccttccgcttcgagccggtc
gaaggtgcgagcgccaatgcgctgcccgaccaggttcccgaagaggtgaagaccgagcgt
tacgagcgcctgatggagctttcggcaaggatcagcgccaccaagctcgcggccaaggtc
ggcaagaccatcgacgtcatcgttgacgcggtcgatgtggaaagcggcggcgccaccggc
cgctccaaggctgacgcgccggaaatcgatggcgaagtcctgcttcgcgatgcgggccat
ctcgaacccggcgatatcgtcagcgtgatcgtcgaagacgccgacgaccacgatttgtat
ggcgcgcttactgcgccggcgcaggcggttcccgaacggtcgattgcaggttga
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