Sphingobacterium siyangense: JVX97_18720
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Entry
JVX97_18720 CDS
T08059
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssiy03009
]
JVX97_18720 (rsmD)
Enzymes [BR:
ssiy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
JVX97_18720 (rsmD)
Ribosome biogenesis [BR:
ssiy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JVX97_18720 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_25
TehB
MethyltransfD12
Methyltransf_15
Spermine_synth
Met_10
DNA_methylase
RrnaAD
BpsA_C
TRM
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QRY56049
LinkDB
All DBs
Position
complement(4386423..4386962)
Genome browser
AA seq
179 aa
AA seq
DB search
MRIIGGRLGGLRLNPPTNLPVRPTTDIAKEALFNILQNRLDFDRLKCLDLFAGTGNISLE
LASRDVESVDAIDLHFKCVQYINETAGKMKLEQIKARKADVFKFIASCKNTYDFIFADPP
YDIPKLPQLPKLIFEQELLYEHGLLVVEHPSTRQMEDHPNFIETRKYGYSSFSFYAKTI
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcgaataatcggaggtcgtttaggtggtttaaggctgaacccaccaaccaatttacct
gtgaggccaaccacggatatcgctaaggaagcgctgtttaatattttacagaaccgactg
gattttgatcgtttaaagtgtctggatctttttgcgggaacaggaaatattagtcttgag
ctcgcatcgcgggatgtggaatcagtagatgcaatagatcttcatttcaaatgcgtgcaa
tatatcaatgaaacagccgggaagatgaaactggagcaaattaaagcaaggaaagccgat
gtatttaagtttattgccagctgtaagaatacctatgattttatttttgcagacccacct
tatgatattcctaaattgccacaattgccaaaattaatttttgaacaggaattgctgtat
gaacatgggctccttgttgttgagcatccgtcaacaagacaaatggaagatcatccaaat
tttatagaaactagaaaatacgggtattcatcattttccttttacgctaagactatctaa
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integrated database retrieval system
