Sclerotinia sclerotiorum: SS1G_04335
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Entry
SS1G_04335 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SS1G_04335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_04335
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SS1G_04335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
DUF1564
AAA_23
AAA_29
AAA_21
AAA_27
Motif
Other DBs
NCBI-GeneID:
5490695
NCBI-ProteinID:
XP_001594528
UniProt:
A0A1D9PWB7
A7EG94
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MVKNKENETTPARPPPSLKKQNSSVGSSKNQASILGFFSKKPASTPTRKPSTDAPGGILQ
PNGSANSSKSTPKPSSTVKRPQFKKSVQKSVTPVPSSDNIEPPSSQENKNGGIPTEVDDC
SSSPPAPAEKAAEQLADIDGLVLASSPSRKAAKKVISYAESDDDDEDVTPRTTQRRKGKK
PMIESDDDDEDTFMGDLYGADDDDDELDDFVVDDDFDAPSKSSRKRKRPISTTAPRKRSN
ISPAHQSFDDDEDIQIPEASTAQQWKYDPENIQPLKAKSSSVPRTPNSSGKKFKEKASKS
DPDQRYEWLANERDIDRNPPGHPDYDPRTLYIPPMAFNKFTPFEKQYWEIKQKCWDTILF
FKKGKFYELYERDATIGHQIFDLKLTDRVNMSMVGVPEMSLQHWANQFLAKGYKVAVGDQ
KESALAKEMREREDSAGPSSKGKKPDKIIHRELSYILTAGTLVEGSMLQDDSATYCVAIK
ESITDDNLPAFGISFVDTSTGQFFLSEFTDDVDLTKFETFVAQIRPQELLLEKSCVSTKV
LRILKNNTGPTTVWNYLKSEKEFLTAEKSRRELDYGGYFASGDGGKETWPEELEKARDND
LLISAFGALFQYLKVLQLEKALLTQGNFAWYNPIQKGTTLVLDGQTLINLEIFSNTFDGN
TDGTLYTLLDRCTTPFGKRLFRQWVSHPLSDIKRINERLDAVDLLNKDDNLSRSFKSSTS
TLPDLERLISRIHAGSCRPEDFLKVLEGFEQIEYIQKEILGNYSGGDGVFSRLVATIPNL
ADPLQWWKNAFDRKKAKEDKILVPERGVEEDFDASQDRIEEIHQELASLLKKYQKKYDSK
KIEFKNIGKEIYQLQMPVSIKVPNDWKMMSAASGFKRYYFPELTNIIRDLQETQETHGQI
VKQVASRFYARFDEDYEIWLQAVKTVAQLDCLFSLAAASSALGTPSCRPKFVDSERSVVE
FEELRHPCILPNVTDFIPNDVQLGGKSANINLLTGANAAGKSTILRMTCVAVIMAQLGCY
VPAKSATLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATSRSLVILDELGRGT
SSYDGVSVAQAVLHHVASHIGCIGFFATHYHSLALEFDSHPEVINKRMAIEVDDESRSVL
FLYKLENGVAEGSFGMHCASMCGIPRKVVDRAEVAAREWEYTSRLGESLERARGEKGIYL
PLGMLSDVAWCLKETGTKGKRLEVENEESGISERGLDCLLRAIEAL
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaataaagagaatgagacgaccccagctcgccctcctcccagcttgaagaaa
caaaattctagcgtgggatcgagcaaaaatcaagcatcaattcttggatttttttcgaag
aaacctgccagtactccgaccaggaaaccttccacagacgcgcctggtggaatcttgcaa
cccaatggctctgcaaatagttcaaaatctacaccgaagcccagcagcaccgtgaagaga
ccccagttcaaaaagtccgtccagaagagcgtaaccccagtcccaagtagcgacaacatt
gagccaccaagctcacaggagaacaaaaatggtggaatcccgacagaggtagacgattgc
tcgtcatcgcctccagcacctgctgaaaaggcagcggagcagcttgcagatatcgatggt
ttagttctagcgagcagcccttcacgaaaggcggcgaagaaggtaattagctatgccgaa
tctgacgatgacgatgaagatgtaactccgagaactactcaacgaagaaagggaaagaag
ccaatgattgaaagcgatgatgacgatgaggatacatttatgggtgacttatatggagct
gatgatgacgatgatgaattggacgatttcgttgtcgatgacgatttcgatgctccaagc
aaatcttctagaaagagaaagcggccaatatccacgacagcacctcgaaagcgatctaat
atatcgccagcccatcaatcattcgatgacgatgaggatatacaaataccagaggcttcg
acagctcaacaatggaaatatgacccagagaacattcaacctttaaaagccaagtcttcg
agtgtcccgaggactcctaattcgagtgggaagaaattcaaagaaaaggcatccaaaagt
gacccagatcaacgatatgagtggctagcaaatgagcgggacattgatcgaaatcctcct
ggtcatcctgattatgatcctcgtacgctatacataccgccaatggcgttcaacaagttt
acacccttcgagaagcaatactgggaaataaagcaaaagtgttgggacactattcttttc
ttcaagaagggcaagttctacgaattatatgagagagatgctaccattggacatcagata
tttgatttgaaacttactgaccgcgttaatatgtcaatggtcggtgtaccagaaatgtca
ttacagcactgggcaaaccaatttcttgccaaaggatacaaagttgccgttggtgatcaa
aaggaatcggctttagcaaaagaaatgcgtgaacgagaagatagtgcaggcccgtcaagc
aaaggcaagaaacctgataaaatcattcatcgagagctatcttatattctcaccgctggt
accttggtcgagggtagtatgttacaagatgattcagcaacatactgcgtggccatcaaa
gagtccatcacagatgataatttgccagcatttggtatatcatttgttgatacatctaca
ggccagttttttctctccgaattcactgatgacgtagatttgaccaaatttgagacattt
gtcgctcaaatccgtcctcaggaactgttgctcgaaaagtcatgtgtttcgacgaaggtg
cttcgtatcttaaagaataacactggcccaacaactgtttggaattacttaaaatcggag
aaggaatttttaaccgctgagaaatcccgcagagaattagattacggtggttactttgct
tcaggagatggtggaaaagaaacctggcctgaagagcttgaaaaagcaagagataatgat
ctgttgatttccgccttcggagctcttttccagtatttgaaagtccttcagcttgagaaa
gctcttcttacgcaaggtaacttcgcttggtacaatcccatccagaaagggacaactctt
gtacttgatggtcaaactcttatcaacctcgagattttttccaacacattcgatgggaat
acagatggtaccctatacacactcctcgatcgttgcactacaccatttggaaagcgattg
tttcgacaatgggtgtcgcatcccctgtccgacattaagaggattaacgaacgtctcgat
gctgtggatttgctaaacaaagatgataacttgagtcgttcattcaaatcctcaacttcc
acgttgcctgatttggaacgtcttatctctcgaatccatgctggatcatgcagacctgaa
gattttctcaaagtactagaagggtttgagcaaatcgaatacatccaaaaggaaatcctt
ggtaattatagtggtggtgatggcgtctttagtcgtttggttgcgacaattcctaacctt
gcggatcctctacaatggtggaagaatgcatttgatcggaaaaaggcaaaagaggacaaa
attctggttcctgaaagaggagtcgaagaagattttgatgcgagccaagaccgtattgag
gagattcatcaagagctggcatccttactgaaaaaatatcagaagaagtatgattcaaaa
aaaatcgagtttaagaatattggcaaagagatctatcaactgcagatgccggtctctatc
aaagtacctaacgattggaagatgatgtctgctgcatccgggtttaagcgctactacttc
cccgaactcaccaacataatccgagatcttcaagagactcaagaaacgcatggtcaaatt
gtcaagcaagtagctagcagattttacgcgcgtttcgatgaagattatgaaatatggctt
caggctgttaagactgttgcccaacttgattgtcttttcagtcttgctgctgcatcctca
gcccttggtactccatcttgtagacccaagtttgttgactcggagcgaagtgtggttgaa
tttgaagaacttagacatccttgcattttaccaaatgtgacggactttattcctaatgat
gtccaacttggtggaaagtcagctaatatcaatttactcactggtgctaatgcggccgga
aagtctacaatcctacgaatgacctgcgtcgcagtaataatggcacaactaggttgttac
gtacctgccaaatccgcaacacttactcctgtcgaccgtatcatgtcccgtttaggtgcc
aatgacaacatctttgccgcccaatccaccttcttcgtcgaactctcagaaactaagaaa
atcctctctgaagctacgtctcgatccctcgtcatcctcgacgaactcggtcgtggcacc
agtagttacgatggtgtctcagtcgctcaagctgtacttcaccacgtcgcatctcatatc
ggctgtatcggtttcttcgccacgcattaccattctctcgctctagaattcgattcccac
cccgaagtcatcaataagcgtatggctatcgaagttgacgatgaatcaagaagcgtactc
tttttgtataaattagaaaatggagttgccgaaggtagtttcggtatgcattgtgcaagt
atgtgtggaataccacggaaagtggttgatagagctgaagtcgcggcgagggaatgggag
tacactagtagacttggagaaagcttagagcgggcaagaggagaaaagggaatttatttg
ccgctgggcatgttgagtgatgtggcttggtgtttgaaggaaacggggacgaaggggaag
agactagaggttgaaaatgaagaaagtggcattagtgagaggggattggattgtcttttg
agagctattgaagctttgtga
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