Sclerotinia sclerotiorum: SS1G_05928 Help Entry SS1G_05928        CDS       T01071                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism ssl  Sclerotinia sclerotiorum Pathway ssl03020   RNA polymerase ssl03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:ssl00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     SS1G_05928   09124 Replication and repair    03420 Nucleotide excision repair     SS1G_05928  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ssl03021]     SS1G_05928    03400 DNA repair and recombination proteins [BR:ssl03400]     SS1G_05928 Enzymes [BR:ssl01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      SS1G_05928 Transcription machinery [BR:ssl03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      SS1G_05928 DNA repair and recombination proteins [BR:ssl03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       SS1G_05928 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R Motif Other DBs NCBI-GeneID:  5488853 NCBI-ProteinID:  XP_001593006 UniProt:  A0A1D9Q4M9 A7EKT1 LinkDB All DBs Position Unknown AA seq 1746 aa AA seqDB search MANLNFAHSDAPLRTIQEIQFGLFSPEEIKNMSVAHILYPETMDESKMKPREQGLNDPRL GSIDRQFKCATCDQNMSECPGHFGHIELAKPVYHPGFLKKTKKLLEMVCHNCGKVKLDRS NPAYKAAVSIRDPKRRFEAIWKLCKTKMICDSDVQMNEEEFNADPKEAAKKSHGGCGNIQ PEVRQTALALWGTWKAPKDEDGEAVQPDKRQITPDMALNVFRSMSTAEIQDVGLNADYAR PEWMIITVLPVPPPPVRPSISMDGTGQGMRGEDDLTYKLGDIIRANGNVRQAQQEGSPQH ILQDFETLLQYHVATYMDNDIAGQPPALQKSGRPVKSIRARLKGKEGRLRGNLMGKRVDF SARTVITGDPNLSLDEVGVPRSIARILTYPETVTPLNIDKLHQLVKNGPDEHPGAKYVIR SDGTRIDLRHHKRAGAISLEYGWKVERHIVDGDFIIFNRQPSLHKESMMGHRVRVMPYST FRLNLSVTSPYNADFDGDEMNLHVPQTYETRAEVMNLCMVPLNIVSPQRNGPLMGIVQDT LAGVYKICRRDVFITKEHLMNILLWVPDWDGVIPQPAILKPRPRWTGKQIVSLIIPKIVN SYNASKDKEHLHAPLNDDGCLIQEGQLMYGLMAKKNVGASGNGIVHIVFNEQGPDAAMAF FNGCQRVINYWLLHNGFSIGIGDTIPNKETIEQIEKAIAKQKAEVTELVEKATSNELESL PGMNVRETFESQVSKALNEARNTAGTKTEDGLLDINNAVQMARSGSKGSTINISQMSALV GQQSVEGKRIPFGFKYRTLPHFTKDDYSPESRGFVENSYLRGLTPTEFFFHAMAGREGLI DTAVKTAETGYIQRRLVKALEDVMAKYDGTVRNSLGDIVQFVYGEDGLDGVIFENQKMDH INISNKAFNDLFKLEVMSERISTDVLEHANELYGDLETQQLLDAEFAALEEDRRILRDFV HSRTKEKDDDHFQLPLNIIRIIDSAKRLFKTDDGKRSDLHPRDVIPRVQQLLDRMIIVRG TDELSVEAQYNATIFIKAQFRSRLAYKRIALGMHLNKLAFEHILGELETRFTRALVNPGE MVGVLAAQSIGEPATQMTLNTFHFTGISSKNVTLGVPRLKEILNIAPNIKTPSMIVYQDG PNANQETAKLLRSAVEHTTLRSVTYATEIYHDPDIQSTTIEDDIDMVESYFIIPEEHHDS PDNQSRWLLRLILDRQKMLDKGLKVDDVAIKIKENYPKDLAVIFSDNNAEQQVIRIRMIK QSDSKYDDDDIEEDIMLKRLEAHILDTLTLRGVLGIDRAFLNKDVKLFEKPDGRLVASRE DKDCEEWYLDTSGTSLKEVLTVPGVDPRRTYSNHFIQVFVVFGIEAARSALMRELTMVLA FDGSYVNHRHLALLTDIMTSRGHLMAITRHGINRADTGALMRCSFEETVEILLEAAAVGE LDDCRGISENVMLGQLAPMGTGEMDVLLDPKMLETVISDNSRMGLMAGIPVKGGEGGAAT PYDGQSPLNEGGYLGTPDYGAAFSPIQSAGSETPSGFATEYGGSLGFGGGMSPYGAGSRS PGGGYSPTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTSP AYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPN YAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPSYSPTSPNFSPTS PRGGNN NT seq 5241 nt NT seq  +upstreamnt  +downstreamnt atggcgaatcttaattttgcgcattcagatgcgccattacggactatccaggagattcaa tttggtctcttctctcctgaggagatcaaaaatatgagtgtagctcatattttgtatcct gagactatggacgagagtaagatgaagccaagagagcaaggtcttaatgatccccgactt ggttctattgacagacaatttaaatgtgctacttgtgatcaaaatatgtcggaatgtcct ggtcatttcggtcacatcgaactggccaaacctgtttaccatcctggtttcctgaaaaag acaaagaagctcttggagatggtctgccacaactgtggtaaagttaaactagacaggagc aatccagcttacaaggcagccgtttctatccgcgatcctaagcgcagattcgaggctata tggaagctctgcaagaccaagatgatttgtgacagtgacgttcagatgaatgaggaggag tttaacgcagatccaaaggaagctgcaaagaaatcgcacgggggttgtggcaacattcag cctgaagttcgtcaaactgctctggccctctggggtacttggaaagctcccaaggatgaa gatggagaggctgtgcagcctgacaagagacaaatcactccggatatggcactcaacgtc ttccgcagcatgtctactgctgaaattcaggatgttggattgaatgcagattatgctcgt cctgagtggatgattattaccgttcttccagtaccaccacctcctgttcgaccgagtatt tccatggatggtactggtcagggtatgcgaggagaggatgatttgacatacaagttgggc gatatcattcgtgccaatggtaatgttcgacaagcacaacaagaaggttcgcctcaacac attctgcaggattttgaaactctgctgcaatatcacgtcgcaacctacatggacaacgat attgctggtcaaccaccagctctgcagaagtcgggtagacctgtcaaatccattcgtgct cgtctcaagggtaaggaaggtcgtctccgtggaaatttgatgggaaagcgtgtcgacttt tctgctcgtaccgttattacgggtgatcccaatctttccctagatgaggtcggagttcct cgaagtattgccagaattctcacgtatccggagaccgttacaccactaaacattgataag ttgcatcaacttgtcaaaaatggtccagatgagcatcctggtgccaagtatgtcatccga tctgatggtacacgtattgatcttcgtcatcacaagcgcgcaggtgcaatttcacttgag tatggttggaaggttgagagacacattgttgatggtgatttcattatcttcaatcgtcaa ccatcgttgcacaaggaatctatgatgggtcatagagttcgtgttatgccttactccact ttccgtctcaatttgtctgtcacatcaccatataacgcagattttgatggagacgagatg aacttgcatgttccacaaacatatgagactcgtgccgaggtcatgaatctctgcatggtg ccacttaacattgtttctcctcaaagaaacggtcctctcatgggtatcgttcaagataca ctggctggtgtttacaaaatctgtagaagagatgttttcataacaaaagagcatttgatg aacatcttgttatgggttccagactgggacggtgtcattcctcaacctgctattcttaag ccacgtcctagatggactggaaagcaaattgtcagtttgatcatccctaagatcgtcaat tcctacaacgccagcaaggataaggagcatttgcatgcgccattgaacgatgatggttgc ttgatccaggagggacaactcatgtatggtcttatggccaagaagaatgtaggagcttct ggtaatggtattgttcatattgttttcaatgaacaaggtcctgatgctgcaatggccttt ttcaacggttgccagcgagttattaattattggctccttcataatggtttcagtatcggt attggtgacacgattcccaacaaagagaccattgagcagattgagaaggctatcgctaag cagaaggctgaagtcacagagcttgttgagaaggctactagtaacgaacttgaatccctt cctggtatgaacgttcgtgaaaccttcgagagtcaagtctccaaagctttgaacgaggct cgtaacacagctggtacaaagaccgaggacggattgttggatatcaataatgctgtacag atggctcgctctggttctaaaggttctactatcaatatctctcagatgtctgcccttgtg ggccaacaatctgttgaaggtaaacgtattcctttcggtttcaaataccgtactcttcca catttcaccaaggacgattattcgccagaatcgagaggttttgtcgaaaactcatacttg aggggtctcactccaacagagttcttcttccacgccatggctggtcgtgaaggtttgatt gataccgcggttaagactgcagaaactggttatattcaacgtcgtcttgtcaaagctctt gaggatgttatggccaaatatgatggtaccgtccgtaactcacttggtgacattgttcag ttcgtctatggtgaagatggtctagacggtgtcattttcgagaatcaaaagatggatcat atcaacatcagtaacaaggcattcaatgatctcttcaaacttgaagttatgtctgagcgg atttcaacagatgtcctagagcatgcaaacgaactctacggagatcttgagacgcaacaa ctgcttgatgcagaatttgctgcactggaagaggacagaagaattcttcgagacttcgtc cactctcgaaccaaggagaaggatgacgatcacttccaacttcctttgaatatcattcgt attatcgacagcgcaaagagattgttcaagactgatgacggaaagcgcagtgatttacat cccagagatgtcatcccaagagtgcagcagttactcgaccgtatgatcattgtccgtgga actgacgagctttctgttgaagctcaatataatgccacaattttcatcaaggcgcagttc cgatctcgtcttgcctacaaacgtattgcactcggtatgcacctcaacaagcttgctttt gaacacattcttggtgagctcgagactcgtttcactagagctttggtcaaccctggtgag atggttggtgtgcttgctgcacagtctattggtgaaccagccacacaaatgaccttgaac actttccatttcactggtatttcatccaagaacgttactcttggtgtgccacgtctcaag gaaattttgaatatcgctccgaatatcaagacaccctccatgattgtttatcaggatgga cctaatgctaatcaagagactgctaagttgttgcgaagtgctgttgaacatactaccctg cgctccgttacatatgctaccgagatctaccacgatcctgacattcaatctactaccatt gaagatgatattgatatggttgagtcttacttcattattccagaagagcatcatgattca ccggataatcaatccagatggcttcttcgtcttattctcgatcgtcaaaagatgttggat aagggattaaaggtcgatgatgttgctatcaagatcaaggaaaattaccccaaggatttg gccgtcattttcagtgacaacaatgccgagcaacaagttattcgtatccgaatgatcaag cagagcgattcaaaatacgatgatgatgacattgaggaagatatcatgcttaagcgactc gaggcgcatatcctcgatactttgacccttcgtggtgttctcggtattgacagagctttc ttgaacaaggatgttaagctatttgagaagcctgatggtagattggttgcaagcagagag gacaaggactgtgaagaatggtaccttgataccagtggaacatcactgaaggaagtcttg actgtgccaggagttgatcctcgaagaacctattcgaatcatttcattcaggttttcgtg gtcttcggtatcgaagctgctcgatctgccttgatgcgtgaattgacaatggtgttggct ttcgatggttcttatgtcaaccatcgccatcttgctcttcttactgatattatgacatca cgtggccacctaatggctatcactcgtcacggtatcaatcgtgctgacactggagctttg atgagatgttctttcgaagaaactgttgagattttgcttgaagctgcggcagttggtgaa ttggacgactgccgtggtatttccgagaacgtcatgcttggccagcttgcccctatggga actggagagatggatgttttgcttgatccaaagatgctggaaactgtcatctctgacaac agccgaatgggtcttatggcaggaatccccgttaagggcggtgaaggtggtgctgcaact ccttacgatggccaatctccactaaatgagggtggttatcttggtacacctgattatggt gctgcattctctcccatccaaagtgctggttctgagacaccaagcggatttgcgacagag tatggtggaagtctcggctttggtggtggcatgagtccttatggagctgggtcgagaagt ccgggtggtggttattctccaaccagtcctttcaatgcatctccaacctccccacagttc tctccttccagtcctggttacagtccaacttcgccaatgatgggaggtggtgcaagccct ggatattctgtttcgcctcggttctcgccggtcagccctgcattcacacctacatctcct gcctatagtcctaccagccctagttttgtgtccccaacttcgccttcgtatagtccaacg tcaccaaactattcaccaacctctcctaatatccatggatcaccaactagtccgtcttat agtcctacatcaccatcgtactcaccaacttctcccaactatagtccgaccagtccaaat tatgctggaaataaagtatcaccaggctcaggtctctcacctaccagtcctgtctattct ccaacttctccaaactggagtccatcttcgccccaacaccagggcaacaatacttctcca aaatattccccaaccagtccctcttactctcctacttctccaaacttttctccaacatcc cctcgcggtgggaataactga

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