Sclerotinia sclerotiorum: SS1G_13366
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Entry
SS1G_13366 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SS1G_13366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssl03021
]
SS1G_13366
Enzymes [BR:
ssl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SS1G_13366
Transcription machinery [BR:
ssl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
SS1G_13366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
Rpr2
Motif
Other DBs
NCBI-GeneID:
5481910
NCBI-ProteinID:
XP_001585849
UniProt:
A7F6Y6
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MAPSKSAPAPTNTKWTHEFDTIRREKLFRDPPKDHSAYPALTAAVAPHIESFNALFEKDG
LIAQGLLDIGSKTYLDGDDRLGPSGKNRLTVRIKEVFVEKSMLPPSNKFSTKNREILPAE
CRERHVTYRGKMSARMEYSINNGDPKEFIRDLGQLPLMLMSNKCHLQNNSPAQLVQNKEE
SEELGGYFVVNGIEKIIRLLVVNRRNFPMAIIRPSFKGRGPAYTEFGMLIRSVRPDQTSQ
TNVLHYLNDGNVTFRFSWRKNEFLVPAMMILKALVETNDKEIFEGLVGTPGSKGTDNTFL
NDRVELLLRTYKAYGLYTKSKTRAYLGEKFRIVLGVPDTMSNYDVGTEFLRKIVLVHLGN
TNVTEAQDKDKFKMLLFMTRKLYSLVAGDCAGDNPDAVQNQEILLGGFLFGMIIKERLED
WLHTSLRMALRDYVRRSPENNFVTPEFLKDFPVKICSRTNEQVGGALEYFMSTGNLVSPT
GLDLQQTSGFTVVAEKINFLRFIAHFRMIHRGSFFAQLKTTTVPLPKLLSELGVVSTGSS
STDESVVVQLDGKIMGWCSPKQSLVIADTLRYWKVEGTHGVPTNLEIGYIPNSHGGQYPG
IYLSAAPARMVRPVKYLALDKEDFVGPLEQPFMSIAVTEQEIEAGEHTHVEFDPTHILSI
LANMTPFSDFNQSPRNMYQCQMGKQSMGTPGTAIRYRTDNKAYRLQTGQTPIVRAPLHND
YGFDNFPNGMNSVVAVISYTGYDMDDAMIINKSAHERGFGHGTIYKTKKYELEEGHKSRS
ARNIKKLFGFAPGGLVKAEWKAAIDEDGLPFIGRMVQNGDLIAAWHTVSMDENGKYVNRD
GQTHFEKYKETEIAFIEEVRLIGNENGIEPCQAISVKLRIPRSPVIGDKFSSRHGQKGVC
SQKWPAVDMPFTESGIQPDTIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFD
EEHKAGDYFGHQLMKAGYNYYGNEPMYSGITGEELHADIYIGVVYYQRLRHMVNDKYQVR
TTGPVTQLTGQPIKGRKKGGGIRVGEMERDSLLAHGTAFLLQDRLLNCSDYTKSWICKEC
GTFLSTQPTVSAFASKKKGTGVVRCRKCATRAEGKFGGGEVWEDGKGQRWVGGEDTTVVA
VPGVLKYLDVELAAMGIKLKYNVGP
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggctccctcgaagtctgcccctgctcccacaaatacaaaatggactcatgaatttgat
acgattcgaagagagaagcttttcagagaccccccaaaagatcactcagcatatcctgca
cttacagctgcagttgcacctcatatcgagtctttcaatgcacttttcgagaaagatggt
ttaattgcccaaggtttattagatattggatccaagacatacctcgatggagatgatagg
ttaggacctagtggaaagaatagattgaccgtcagaatcaaggaggtttttgttgaaaag
tctatgttgcctccatccaacaaattttctaccaagaacagagaaattttaccggcggaa
tgcagagaacgacatgttacctacagaggaaagatgtcggcgcgcatggagtactcgatt
aacaatggggacccaaaagagtttattagagatcttgggcaattgcctttgatgttgatg
tcaaacaaatgccatcttcaaaacaactcaccagcacagcttgtacagaacaaagaagaa
tccgaggagctcggaggatatttcgtggtgaacggaattgagaaaatcattcgtcttctt
gttgtgaatcgtaggaatttccccatggccatcattagaccttcattcaaaggcagaggt
ccagcatacaccgaattcggtatgctgattcgatccgtacgacctgatcaaacttcccag
accaatgttcttcactatctgaatgatggaaacgttactttccgtttctcgtggcgcaag
aatgagtttctggtacccgccatgatgattttgaaggcgttggtggagacaaacgacaaa
gaaatttttgaagggcttgtcggcactcctggttcaaagggaacggataacacattcttg
aatgatcgggtggaattgttattacgaacctacaaggcctacggtttgtacacaaagagc
aagactcgagcatacttgggcgagaagttcagaatcgtccttggagtcccagataccatg
tcaaattacgatgtcggaacggaatttctgcgaaagattgtcctcgtccatctcggaaat
acaaacgttacggaagcgcaagacaaggataaatttaagatgcttctttttatgaccaga
aagttgtattctttggttgctggggactgtgctggtgacaatcctgatgcggtccagaat
caggagattttgcttggaggatttttgttcggaatgattatcaaggagagactggaggat
tggcttcacactagtttgagaatggcgttgagggactatgttcgacgaagcccggaaaac
aacttcgtaacaccagaatttttgaaagatttccctgtcaaaatttgttcaagaacaaat
gaacaggttggcggtgctttagagtacttcatgtcaactggaaatctagtcagtcccacg
ggattggatcttcaacaaacctctggatttacggttgttgcagaaaagattaatttcttg
cgattcatcgcccatttccgcatgattcacagaggtagtttcttcgcccaattgaaaact
actaccgttcctttaccaaagctcctttcagaactaggtgtcgttagtaccggctcatca
tccactgatgaaagtgttgtcgttcaattagatggaaagattatgggatggtgttcaccc
aagcaatctctcgtcattgccgatactttacgttactggaaggtcgaagggacacatggt
gttccgactaacttggagatcgggtatatccccaattctcacggaggacaatacccaggt
atctatctttctgctgcgccagctagaatggtcagaccagtgaaatatctagcgctcgat
aaagaagattttgttggcccacttgagcaaccttttatgtctattgctgtcaccgagcag
gagattgaagccggggaacacactcacgtcgagtttgaccctactcatattctctccatc
cttgccaacatgactcctttctccgatttcaaccaatcgcccagaaacatgtatcaatgt
cagatgggtaaacaatctatgggtacacctggaactgccatccgttacagaaccgacaac
aaggcttatcgtctccaaaccggacaaactccaattgttcgcgcaccactccataacgat
tatggtttcgacaatttccccaatggaatgaactcggtggttgccgtcatttcttacacc
ggatacgacatggacgatgctatgattatcaacaagtccgcgcacgagcgcggcttcggt
catggaacaatctacaagacgaaaaagtacgaattagaagaaggacacaaatctcggtct
gccagaaatatcaagaagctctttggtttcgctcctggtggactcgtgaaagctgagtgg
aaagcagccatcgatgaggatggtttgccgttcatcgggcgcatggttcaaaatggggat
ttgattgctgcatggcacacggtttcgatggatgagaatggaaaatacgtcaatcgagat
ggtcagactcacttcgagaagtacaaggagactgaaattgcattcatcgaagaagtaaga
ttgattggaaacgagaacggaatagagccttgtcaagctatttctgtcaaacttcgcatt
ccacgttctccagtcattggagataaattttcaagtcgtcacggacagaagggtgtttgt
tcgcaaaagtggccagcagtcgatatgccatttacggagtctggtattcaacctgatact
attatcaatcctcacgctttcccttctcgtatgactattggtatgttcgtcgagtccttg
gccggaaaagcaggagcattacatggtttggcgcaagatagtacaccattcaagttcgat
gaggagcacaaggcgggtgattatttcgggcatcaattgatgaaggctgggtacaattac
tacggtaacgaacctatgtattccggtatcaccggagaggagttgcacgccgatatctac
attggagttgtctattaccaacgtcttcgtcacatggtaaacgataaataccaagtcaga
accactggtccagttacacaactcaccggtcaaccaatcaaaggtagaaagaagggtggt
ggtatccgtgtgggagagatggaacgtgattctctgttggctcacggtacagctttcttg
ttacaagacagactactaaactgttcggattacaccaaatcatggatctgcaaggagtgt
ggtactttcttgtcgacccagcctacagtctcagcatttgcaagcaagaagaaaggaacg
ggtgtggtgagatgcagaaaatgtgccacgagagcggaaggaaagtttggtggaggagag
gtatgggaagatggaaagggtcagaggtgggttggtggtgaggacacaaccgttgttgct
gtcccaggtgtgttgaagtatttggatgttgagttggcggctatgggtatcaagttgaag
tataatgttgggccttga
DBGET
integrated database retrieval system