Sediminispirochaeta smaragdinae: Spirs_0178
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Entry
Spirs_0178 CDS
T01287
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00860
Porphyrin metabolism
ssm01100
Metabolic pathways
ssm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Spirs_0178
Enzymes [BR:
ssm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
Spirs_0178
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GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
ADK79335
UniProt:
E1R8J1
LinkDB
All DBs
Position
complement(183738..184700)
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AA seq
320 aa
AA seq
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MNLCLPILAGALLYDLLWGDPPNRFHPVAWMGSLISRLWQHRPKQGKWLLFSYGALMTIC
GALLFSLPLLLLNRIPILPRLVLSIVFLKMSFSLTTLLRTGDKIARALEAGDLASARKLT
AFHLVSRNTSELEESELCGAVVESLAENLTDSFTSPLLYYLLAGLPGAFAFRYINTSDAM
IGYRTGDFEFGGKWAARCDDLLNFIPARVTALLIILAGSIIPIRSAPGEGNGAGRKRSLA
SLFAWQNATESPNAGWTMGAAAAILGLRLEKRGHYVINSTGRLPKPADIRRCIRLVRRSA
LLFLLLLAGILACTGVILGS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttgcctgccgattcttgcgggagccctgctttacgacctgctttggggcgat
cctcccaaccgttttcatccggtagcctggatgggaagcctcatttcccgcctctggcag
catcggcccaaacaggggaagtggcttcttttttcctacggcgcccttatgaccatctgt
ggagccctgctcttttcccttcccctgcttcttctaaacaggattccgatcctgccgagg
ttggttctgtcgatcgtttttttgaaaatgagcttttctctcaccaccctcctgcgaacg
ggggacaagatcgcacgggcgctggaagccggggaccttgcatcggcgagaaagctgaca
gcctttcaccttgtcagtcggaacacgagcgaactggaggagtcggagctctgcggtgcg
gtggtcgaatcccttgcggagaaccttaccgacagctttacctcaccccttttgtactat
cttcttgcgggccttcccggtgcctttgccttccgctatatcaataccagcgatgccatg
ataggctaccgcacgggagacttcgagttcggaggtaaatgggcggctcgttgtgatgat
cttctgaattttatcccggccagagtgacggccttgctcatcattttggccggaagcatc
ataccgatacgatcagcccctggggagggtaatggtgccgggaggaaaagatccctggcg
tccctctttgcatggcagaatgctaccgaaagccccaacgcaggctggaccatgggcgcc
gcagccgctattttaggcttacgcctggaaaaaagagggcactacgtcataaacagtaca
ggtcgccttccgaaacccgccgacattcgccgttgcattaggctggttcgaagatcggcc
cttctttttcttctacttttggccggtatccttgcctgtacgggggtgatccttggttcc
tga
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