Sediminispirochaeta smaragdinae: Spirs_1162
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Entry
Spirs_1162 CDS
T01287
Name
(GenBank) glycoside hydrolase family 3 domain protein
KO
K01207
beta-N-acetylhexosaminidase [EC:
3.2.1.52
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00520
Amino sugar and nucleotide sugar metabolism
ssm01100
Metabolic pathways
ssm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Spirs_1162
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Spirs_1162
Enzymes [BR:
ssm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
Spirs_1162
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3
ssDNA_TraI_N
Motif
Other DBs
NCBI-ProteinID:
ADK80291
UniProt:
E1R142
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Position
1219400..1220902
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AA seq
500 aa
AA seq
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MDFDELIGNVFMLGLPSSVLDDVGKDVLAAVRPGSVILFSRNIVDREQVARFIEEITTFL
GYKPLIAIDQEGGIVTRLKKGFTVSPGAMALAATGDPHNAYLAGKLLGQEMKAVGIDWNL
APVVDINSNPLNPAIGIRSFSENADVVIAYASQFAAGLEKSGILTCLKHFPGNGRVQVDP
HLDMPSLDISREALFRNEMLPFLSIPAPSWMPTHIYVPTLQSRREAVTVSREVLTGLVRD
KLKYKGLLVSDDLNMGGVAHVLRADDLAVETLAAGMDMISFCDNPEKQLMAASAVAGRVA
RDEVFAERVRQASARVKTMCSLRDRADGSRSSLVDFEANGRKMDFISLKSVRLVKNEEQA
VPLCSVDNVFTMRSSRLVLIEEGSEGIPAVASRAAEKLSCPLSIYERTITDAEAAVLKRQ
AKGKSNLIFTENAHLEPSLVRFIEDLAQISGRLVLVALRNPYDTDIAGIQNAVASYGYTA
AQQEGVMRLLFPGAFEEGCV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgatgaactgatcgggaatgttttcatgctgggcctgccttcttcagtgctt
gacgatgtgggaaaggatgttcttgccgccgtcagacccggatcggtcattttattttcc
agaaatatcgttgacagggagcaggttgcccggtttatcgaagagataacgacttttctc
ggatacaagccgctcattgcgatcgatcaggaaggtggtattgtcacaaggctgaaaaag
ggatttaccgtttctcccggcgccatggctctggccgcaaccggcgatccccataatgca
tacctggcgggaaaactgctcggccaagaaatgaaggccgtaggcatcgactggaacctc
gcccccgttgtcgatatcaacagcaatccgcttaatcctgccatcgggattcgcagtttt
tccgaaaatgccgatgttgttattgcctatgcatcacagtttgccgcaggccttgagaaa
agcggcatcctgacctgcctgaagcattttccgggcaacggccgggttcaggttgatccc
cacctcgatatgccctctctggatatttcccgggaagcgttgttccgtaatgagatgctt
ccctttctctctattcccgctccttcctggatgcccacccacatctatgtgcccacatta
caaagccgcagggaggctgttaccgtttcaagggaggtcctgaccgggctggtcagagac
aagctgaaatacaaggggcttttggtttctgatgatctgaacatgggcggcgtggcacat
gttctccgggccgatgaccttgcggtcgagaccttggcagcgggtatggacatgatttcg
ttctgtgacaacccggaaaagcagctgatggcagcctctgccgttgccgggagagttgcc
agggacgaagtgtttgcggagcgggtaaggcaggcctcggcgagggtgaaaacgatgtgt
tcccttcgtgacagggcggacggttctcgttcctcccttgttgattttgaggcgaacggg
cgaaagatggatttcatttccctgaaatcggtgcggcttgtaaaaaatgaggaacaggcc
gttcccctttgttccgtggataatgtgttcaccatgagaagcagccgacttgttctcatt
gaagagggcagtgaaggaatccctgcggttgcgtcccgtgccgccgaaaagctttcctgt
cccctttccatatacgaaagaaccatcaccgatgcagaagcggcggttttaaagcggcag
gcgaagggaaagtccaatcttatctttacggaaaatgcccatctcgaaccgtctctggta
cggttcatcgaggatctggcacagatatcaggcaggcttgtacttgtcgccctgcgaaac
ccatacgatacggatattgcgggaatacaaaatgcggtcgcctcgtatggctatactgcg
gctcagcaggaaggggtgatgaggcttctttttccgggagccttcgaggaaggttgtgta
tga
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