Sediminispirochaeta smaragdinae: Spirs_1814
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Entry
Spirs_1814 CDS
T01287
Name
(GenBank) ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
KO
K02897
large subunit ribosomal protein L25
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Spirs_1814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ssm03011
]
Spirs_1814
Ribosome [BR:
ssm03011
]
Ribosomal proteins
Bacteria
Large subunit
Spirs_1814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_TL5_C
Ribosomal_L25p
HEPN_DZIP3
Motif
Other DBs
NCBI-ProteinID:
ADK80940
UniProt:
E1R6C2
LinkDB
All DBs
Position
1958519..1959148
Genome browser
AA seq
209 aa
AA seq
DB search
MEQKTLTGFARTELKKGAARRLRREGKIPAIIYGHSEPVPISVPANEFEKKYSDLSESTI
ITISVGGKEYDVLIKDYQENTMRGEVTHLDFFEIERGKKLKTHVPLHAVGTAQGVKEGGI
LELGFHEIEIECLPKDIPSHLEINIEGMAIGDSRHISDMSVPEGVTVLVSTDMVAASITT
PKVEEEAPEEGEEEAAAEDMTAAEASAEE
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaagacgttaaccggttttgcccgtaccgagctaaaaaaaggtgctgccaga
aggcttcgccgagagggcaagattcccgctattatttacggccactcagaacccgtgcct
atttccgtccctgccaacgagtttgagaagaagtattccgatctttccgagagcacgatc
attaccatttctgtcggcggaaaagagtacgatgttcttatcaaggattatcaggaaaat
accatgcggggtgaagtgacccaccttgatttttttgagatcgagcggggtaagaagctg
aagacccatgtacctctgcatgccgtaggaacggcccagggggtaaaagagggaggtatc
ctcgagcttggtttccacgagattgaaatcgaatgcttgccaaaggatattccttctcat
cttgaaatcaatatagagggtatggccatcggtgattctcggcacatatccgatatgtcg
gttcccgaaggggttactgttcttgtcagcacggatatggttgccgcctcaatcacaact
ccgaaggttgaagaagaggctcctgaggaaggcgaagaggaagctgctgcagaggatatg
acggctgccgaagcgtctgcagaagaatag
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integrated database retrieval system
