Sediminispirochaeta smaragdinae: Spirs_1899
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Entry
Spirs_1899 CDS
T01287
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00730
Thiamine metabolism
ssm01100
Metabolic pathways
ssm01240
Biosynthesis of cofactors
ssm04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Spirs_1899
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Spirs_1899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssm03016
]
Spirs_1899
Enzymes [BR:
ssm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
Spirs_1899
Transfer RNA biogenesis [BR:
ssm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Spirs_1899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
ADK81025
UniProt:
E1R6K7
LinkDB
All DBs
Position
complement(2052758..2053972)
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AA seq
404 aa
AA seq
DB search
MKESLYLIRFGEIALKGDNRIFFERLLRKNIKKKLLPYRSELRMHSGRVYLRCQEAPEEA
VRSVLSSTFGIVGFTKALRCDKRIEEIREAASLIADEIASDGKLQSFKVSARRADKSFPM
TSYEIACDIGARIAGAHQEFHVDVKTPDWVLGVEIREAAYIYGRMEKGPGGLPVGCAGKG
VVLLSGGIDSPVAAFLMAKRGLKLDAVYFHAYPYTSNEALDKVKKLAEILAPYTGGIRLH
VIPFTEAQIFMKQRGRSEELTLHMRAAMVEIADMVAADTGAKALVTGEALSQVASQTIES
ITLTGSFAQRPIFRPVIGLDKEEIITIARRIGTFETSILPYEDCCTIFSPKHPLVHPNKE
LLTTAYRSLSLDEELKRAYEDREVYVFPPHSFQKEDQGTTLPLG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatcactgtatctgatacgtttcggggaaatagccctaaagggagataaccga
atctttttcgaaaggcttttacgaaagaatatcaaaaaaaagctgctgccctaccgatca
gagctgcgaatgcatagtggaagggtgtatcttagatgtcaggaggctccggaagaggcg
gtacgctccgtactctcaagcaccttcggcatagtgggattcaccaaggcccttcgctgt
gacaagcgaatagaagagatcagggaggcagcatcgctgattgccgatgagatagcctcg
gacggaaagctacagagcttcaaggtttccgcacgaagggccgataagagttttccaatg
acctcgtacgaaatagcctgcgatatcggtgcccgtatcgccggtgcccatcaggagttc
catgtcgacgtcaaaaccccggactgggttttgggagtggagatacgcgaagcagcatat
atctatgggaggatggaaaagggcccaggagggcttccggtcggctgtgcaggcaagggg
gttgttttactgtccggtggcatcgactctccggtcgcagctttcctcatggcaaaacgc
ggtttgaaactggacgccgtctattttcatgcgtatccctatacctcgaatgaagccctc
gataaggtgaagaaacttgcagagattttggccccctacaccggaggcatacggcttcat
gtcattcctttcaccgaagcacaaatcttcatgaagcaacggggaagaagcgaggaactg
accctccatatgagggccgccatggtggagattgccgatatggttgccgccgatacggga
gccaaggccctggttacgggcgaggcccttagccaggtagcaagccaaaccatagaaagc
attacccttaccggctcctttgcccagcgccccattttccgtccggtcatcggtctggac
aaggaagagatcatcacgattgccaggagaataggtaccttcgaaaccagtatccttccc
tatgaagactgctgtaccatttttagtcccaaacaccctttggtacaccccaataaggaa
cttcttaccacggcataccgaagcctgagcctcgacgaagagcttaaaagggcatatgag
gacagggaggtatatgtatttcctccccattcgtttcagaaagaagaccaggggacaacc
ttaccccttggttga
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