Sediminispirochaeta smaragdinae: Spirs_3699
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Entry
Spirs_3699 CDS
T01287
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Spirs_3699
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssm01007
]
Spirs_3699
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssm03016
]
Spirs_3699
Enzymes [BR:
ssm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Spirs_3699
Amino acid related enzymes [BR:
ssm01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Spirs_3699
Transfer RNA biogenesis [BR:
ssm03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Spirs_3699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1e
tRNA-synt_1g
Anticodon_2
NAT_N
Motif
Other DBs
NCBI-ProteinID:
ADK82785
UniProt:
E1R7T0
LinkDB
All DBs
Position
complement(3987099..3988676)
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AA seq
525 aa
AA seq
DB search
MSTNAFHWADVTAEKIIRERGDKEVYTCASGITPSGTVHIGNFREIISVELVVRALRERG
KKVRFIYSWDDYDVFRKVPKNMPKPELLETYLRKPITIVPDTSGRYASYAEANEKELEAL
LPGVGVEPEYIYQASRYRSSYYAEGIRQALEKRDTIRAILNEHRTSPLPDEWWPVSVFST
FTDKDTTTVLDWDGEWGLRYRCDETGKEESLDLRTTAAVKLPWRVDWPMRWALEGVDFEP
AGKDHHSEGGSFDTARKVVEQVYGGKAPVSFQYDFIRIKGRGGKISSSSGEVIALPDVLE
VYQPEIVRYLFAGTRPNAEFAISFDLDVLKIYEDYDKCERVYFGVQEISAKKADKEKRIY
ELSQVSDLPGVMPYQVPLRHLCNLLQVNEGDIEAVLDLYPDLKPLQRKRLEVRCRCAWNW
ITTFSPEDFRFSLRKSGDELPKISDSEKKALSLLRDQVDALADHDEKSLAEAIYAVAEEA
GLDAKELFTLCYQVLIGKEKGPRLASFILTVGRDKILAILDRVLS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgaatgctttccactgggcggatgttaccgccgagaagattatccgtgaacgg
ggcgataaagaggtttacacctgtgcttcagggattaccccctcgggaacggtccatatt
ggtaatttcagagagattatctcggttgaattggttgtcagagcgctgagggagcggggc
aagaaggttcgttttatctacagttgggacgattacgatgtctttcgtaaggtccccaag
aatatgcccaagccggaattgcttgagacctatctgcgcaagccgatcaccattgttccc
gatacctcgggacgttacgcaagctatgccgaggccaacgagaaggagctcgaggctctt
ctgcccggtgtaggggtcgaacctgagtacatctatcaggcatccagataccgctcttcc
tactatgcggaagggatcaggcaggcccttgaaaagcgtgataccatacgcgcgattttg
aatgagcacaggaccagcccccttcccgatgagtggtggcctgtttccgtgttttccacc
ttcaccgataaggacacgaccaccgttctcgactgggacggcgagtggggcctgcgctac
cgctgcgatgagacgggcaaggaagagtccctcgatcttcgtacgaccgctgcggtgaag
ttaccctggcgggttgactggcccatgcgctgggccctggaaggggtggatttcgagcct
gccggaaaggaccaccattcggaaggcggttccttcgatacagcccgtaaggttgttgag
caggtctacgggggaaaggcccctgtttcctttcagtacgactttatcaggataaagggg
cggggcggtaagatttcttcttccagcggtgaggtcatcgcccttcccgatgtccttgag
gtctaccaacccgagatcgtgcgctatctctttgccggaaccaggccgaatgccgagttc
gccattagcttcgaccttgatgtgctgaagatttatgaagactacgataaatgtgaacgg
gtttatttcggggtccaggagatcagtgccaaaaaggcggataaggagaagcgcatctac
gagctttctcaggtatctgaccttcccggggtgatgccctatcaggtaccccttcgccac
ctttgcaaccttcttcaggttaatgagggggacatagaggcggtgctcgatctctatccg
gacctgaagccgctccagcgcaaaaggcttgaggtacgctgtcgctgtgcctggaattgg
atcaccaccttcagtcccgaggattttcgtttctctctgcgaaagagcggcgatgaactg
cctaagatcagcgattcggagaagaaggccctttctcttctccgcgatcaggtcgatgcc
ttggcggatcacgacgagaagagccttgccgaggcgatctatgccgtggcggaagaggcc
ggtcttgatgcaaaggagctctttaccctctgctaccaggttctcattggtaaggaaaag
gggccgcgacttgcctccttcatcctaaccgtcgggagggataagatccttgccattctt
gatcgagtactttcctag
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