Shigella sonnei Ss046: SSON_0400
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Entry
SSON_0400 CDS
T00274
Symbol
yajK
Name
(GenBank) putative oxidoreductase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00730
Thiamine metabolism
ssn01100
Metabolic pathways
ssn01240
Biosynthesis of cofactors
ssn04122
Sulfur relay system
Module
ssn_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SSON_0400 (yajK)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SSON_0400 (yajK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssn03016
]
SSON_0400 (yajK)
Enzymes [BR:
ssn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
SSON_0400 (yajK)
Transfer RNA biogenesis [BR:
ssn03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SSON_0400 (yajK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
Rhodanese
tRNA_Me_trans
Glyco_hydro_42
Motif
Other DBs
NCBI-ProteinID:
AAZ87176
ShiBASE_China:
SSO0400
UniProt:
Q3Z4Y6
LinkDB
All DBs
Position
426518..427966
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDEKQR
LAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFS
SIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAVKSKI
EAEEEKFDFSILDKVVEEANNVDIREIAQQTEQEVVEVETVNGFGPNDVILDIRSVDEQE
DKPLKVEGIDVVSLPFYKLSTKFGDLDQNRTWLLWCERGVMSRLQALYLREQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgcttg
cgctttataaaaatccttaccgggaacattcgtaacgttttaaagcactatgatgagacg
ctcgctgtcgtccgccactgggataacatcgaagttcgcgcaaaagatgaaaaacagcgt
ctggctattcgcgacgccctgacccgtattccgggtatccaccatattctcgaagtcgaa
gacgtgccgtttaccgacatgcacgatattttcgagaaagcgttggttcaatatcgcgat
cagctggaaggcaaaaccttctgcgtacgcgtgaagcgccgtggcaaacatgattttagc
tcgattgatgtggaacgttacgtcggcggcggtttaaatcagcatattgaatccgcgcgc
gtgaagctgactaacccggatgtaactgtccatctggaagtggaagacgatcgtcttctg
ctgattaaaggccgctacgaaggtattggcggtttcccgattggcacccaggaagatgtg
ctgtcgctcatttccggtggtttcgactccggtgtttccagttatatgttgatgcgtcgc
ggctgccgcgtgcattactgcttctttaacctcggcggcgcagcgcatgaaattggcgtg
cgtcaggtggcgcattatctgtggaaccgctttggcagctcccaccgcgtgcgttttgtc
gccattaatttcgaaccggtcgtcggggaaattctcgagaaaatcgacgacggtcagatg
ggcgttatcctcaaacgtatgatggtgcgtgccgcgtctaaagtggctgaacgttacggc
gtacaggcgctggtcaccggcgaagcgctcggccaggtgtccagtcagacgctgaccaac
ctgcgcctgattgataacgtctctgatacgctgatcctgcgtccgctgatttcttacgac
aaagagcacatcatcaacctggcccgccagattggcactgaagactttgctcgcacgatg
ccagaatattgtggcgtgatctccaaaagcccgacggtgaaagcggttaaatcgaagatt
gaagcggaagaagagaagttcgacttcagtattctcgataaagtggttgaggaagcgaat
aacgttgatatccgcgaaatcgcccagcagaccgagcaggaagtggtggaagtggaaacc
gtcaatggctttggcccgaacgacgtgatcctcgatatccgttctgtcgatgagcaggaa
gataagccgctgaaggttgaaggtatcgacgtggtttctctgccgttctataaactgagc
accaaatttggcgatctcgaccagaacagaacctggctactgtggtgtgagcgcggggtg
atgagccgtctgcaggcgctctatctgcgcgagcagggctttaacaatgtgaaggtgtat
cgcccataa
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