Shigella sonnei Ss046: SSON_2018
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Entry
SSON_2018 CDS
T00274
Symbol
dcm
Name
(GenBank) DNA cytosine methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00270
Cysteine and methionine metabolism
ssn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SSON_2018 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssn03000
]
SSON_2018 (dcm)
03032 DNA replication proteins [BR:
ssn03032
]
SSON_2018 (dcm)
03036 Chromosome and associated proteins [BR:
ssn03036
]
SSON_2018 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ssn02048
]
SSON_2018 (dcm)
Enzymes [BR:
ssn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SSON_2018 (dcm)
Transcription factors [BR:
ssn03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SSON_2018 (dcm)
DNA replication proteins [BR:
ssn03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SSON_2018 (dcm)
Chromosome and associated proteins [BR:
ssn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SSON_2018 (dcm)
Prokaryotic defense system [BR:
ssn02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SSON_2018 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
DNA_meth_N
Motif
Other DBs
NCBI-ProteinID:
AAZ88683
ShiBASE_China:
SSO2018
UniProt:
Q3Z0M9
LinkDB
All DBs
Position
complement(2111842..2113260)
Genome browser
AA seq
472 aa
AA seq
DB search
MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENHWSAAILKRALANDSAW
HRLSEKEFAHLQTLLPKPSAHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHA
VRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPF
SLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRI
IMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDIS
ECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVT
RTLSARYYKDGAEILIDRGWDMATGEKDFDDPLNQQHRPRRLTPRECARLMGFEAPGEAK
FRIPVSDTQAYRQFGNSVVVPVFAAVAKLLEPKIKQAVALRQQEAQHGRRSR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaatatatcagtaaccgattcatacagcaccgggaatgccgcacaggcaatg
ctggagaaactgctgcaaatttatgatgttaaaacgctggtggcgcagcttaatggtgtg
ggtgagaatcactggagcgcggcaattttaaaacgtgcgctggcgaatgactcggcatgg
caccgtttaagtgagaaagagttcgcccatctgcaaacgttgttacccaaaccatcggca
catcatccgcattatgcgtttcgctttatcgatctatttgccggaattggcggcatccgt
cgcggttttgaatcgattggcggacaatgcgtgtttaccagcgaatggaacaaacatgcg
gtacgcacttataaagccaaccattattgcgatccggcgacgcatcattttaatgaagat
atccgcgacatcaccctcagccataaagaaggcgtgagtgatgaggcggcggcggaacat
attcgtcaacacattcctgaacacgatgttttactggccggtttcccttgtcagccattt
tcgctggctggcgtatcgaaaaagaactcgctcgggcgggcgcacggttttgcctgcgat
acccagggcacgctgttttttgatgtggtacgcattatcgacgcgcgtcgtccggcgatg
tttgtgctcgaaaacgtcaaaaacctgaaaagtcacgaccagggtaaaacgttccgcatc
atcatgcagacgctggacgaactgggctatgacgtggctgatgcagaagataacgggccg
gacgatccgaaaatcatcgatggtaaacattttctgccgcagcaccgtgaacgcatcgtg
ctggtgggttttcgtcgcgatcttaatctgaaagccgattttactctgcgtgatatcagc
gaatgtttccctgcacagcgagtgacgctggcgcagctgttggacccgatggtcgaggcg
aaatatatcctgacgccggtgctgtggaagtacctctatcgatatgcgaaaaaacatcag
gcgcgcggtaacggcttcggttatggaatggtttatccgaacaatccgcaaagcgtcacg
cgtacgctgtctgcgcgttattacaaagatggcgcggaaattttaatcgatcgcggctgg
gatatggccacgggtgagaaagattttgacgatccgctgaatcagcaacatcgtccacgt
cggttaacgcctcgggaatgcgcgcgcttaatgggttttgaagcgccgggagaagcgaaa
ttccgcattccggtttcggacactcaggcctatcgccagttcggtaactcggtggtcgtg
ccggtctttgccgcggtggcaaaactgcttgagccaaaaatcaaacaggcggtggcgttg
cgtcagcaagaggcacaacatggccgacgttcacgataa
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