Shewanella spartinae: K0I31_14400
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Entry
K0I31_14400 CDS
T09209
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sspa
Shewanella spartinae
Pathway
sspa00730
Thiamine metabolism
sspa01100
Metabolic pathways
sspa01240
Biosynthesis of cofactors
sspa04122
Sulfur relay system
Module
sspa_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
K0I31_14400 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
K0I31_14400 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspa03016
]
K0I31_14400 (thiI)
Enzymes [BR:
sspa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
K0I31_14400 (thiI)
Transfer RNA biogenesis [BR:
sspa03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
K0I31_14400 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Motif
Other DBs
NCBI-ProteinID:
QYJ92798
LinkDB
All DBs
Position
complement(3307842..3309299)
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AA seq
485 aa
AA seq
DB search
MKFIVKLFPEIMMKSKPVRMRFTKMLETNIRNVLRKVDEEARVQRQWDKIMVRVPEDKPE
MIERYAERLACIPGIAHVLQVRESTFESVDDIYQQTLALYKDELAGKTFCVRVKRSGKHE
FNSIEVERYVGGGLNQFTEAAGVRLKNPDMTVNLEIDNEHLYLVEKRIDGLGGFPMATQE
DVLSLISGGFDSGVSSFQFIKRGSRTHYCFFNLGGDQHEIGVKQVAYHLWQKYGESHKVK
FISVPFDPVVQEILEKIDNGQMGVILKRMMMRAASRIAEKMGIQALVTGEAMGQVSSQTL
TNLNVIDRSTDMLILRPLIVMDKQDIINMTREIGTEDFAKSIPEYCGVISQKPTVKAVMG
KILAEEEKFSEDLIDRVVEAAEVIDIRDIAVSMDTKITETETVDAVSGGEVVVDIRSPEE
EEQSPLSLNGIEVKCIPFFKLATQFADLDKEKTYLLYCDRGVMSKLQALYLQEQGYHNVK
VYRPA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgtaaaactctttcctgaaatcatgatgaaaagcaaaccggtaagaatg
cgttttaccaagatgcttgaaaccaatatccgaaatgtgctgcgcaaggtcgatgaagag
gccagagtgcagcgtcagtgggataagatcatggtcagggtgccagaagacaagcctgag
atgattgagcgttatgccgagcgtcttgcctgtattccgggtatcgcccatgtgctgcag
gtgcgtgagagcaccttcgagtcggtggacgatatctatcagcagacgctggcactctac
aaagatgaactggccggtaagaccttctgtgtgcgggttaagcgtagcggtaagcatgag
tttaactcaatcgaggtggagcgttacgtgggcggtggactcaaccagtttaccgaggcg
gccggtgtcaggctgaagaaccccgacatgacggtaaacctagagatagacaacgagcat
ctctatctggtggagaaacgtatcgacggcttgggcggtttccctatggcgacccaggaa
gatgtgctgtcgctgatctcaggtggtttcgactctggggtctccagcttccagtttatc
aagcgcggctctcgtacccattactgcttctttaacctaggcggcgaccaacacgagata
ggtgtgaagcaggtggcctatcatctgtggcagaagtatggcgagtcgcacaaggtgaaa
tttatctcagtgccattcgatcctgtggtgcaggagatcctagagaagatagataacggc
cagatgggcgttatccttaagcgcatgatgatgcgcgccgccagccgtatcgccgagaag
atgggcattcaggcgctggtgacgggtgaggcgatggggcaggtgtccagccagactctg
accaacctgaatgtgatcgaccgcagcacagatatgctgattctgcgtccgctgatcgtg
atggataagcaagatattatcaacatgacccgcgagatcggcaccgaagactttgccaag
tctatccctgaatactgtggcgtgatctcacagaagcctacggtgaaggctgtgatgggt
aagatcctcgccgaggaggagaagttctccgaagacttgatcgaccgcgtggtggaagcc
gctgaggtgatcgatattcgcgatatcgccgtcagcatggataccaagatcaccgagact
gaaaccgtcgatgcggtatccggtggtgaggttgtggttgatatccgctcgccagaagag
gaggagcagagcccgcttagccttaacggcatcgaggtgaagtgtattcctttcttcaag
ttggcgacccagtttgccgatctcgataaagagaagacctatctgctttattgcgacaga
ggcgtcatgagcaagctacaggcgctctacctgcaggagcagggctatcataatgtgaag
gtctatcgccccgcataa
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