Salvia splendens (scarlet sage): 121742278
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Entry
121742278 CDS
T07627
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03020
RNA polymerase
sspl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121742278
09124 Replication and repair
03420 Nucleotide excision repair
121742278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121742278
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121742278
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121742278
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121742278
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
Enterotoxin_b
Motif
Other DBs
NCBI-GeneID:
121742278
NCBI-ProteinID:
XP_041991310
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All DBs
Position
7:3649614..3652486
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AA seq
319 aa
AA seq
DB search
MEGVSYQRFPKIKIREVKDDYMKFELRETDASIANALRRVMISEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLISERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDTTLDV
TSKDLYSSDHTVVPVDFSDASSTIDNTESRGIIIVKLRRGQELILRAIARKGIGKDHAKW
SPAATVTFMYEPEIYINEELMETLSMAEKQEFVDSSPTKVFDINPRNGQVYVHNAENYTY
DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKASQLLINAIEILKQKLDAVRLSA
DTVEADEQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgtttcgtaccagagatttcccaaaatcaaaattcgggaggtgaaggacgac
tacatgaagttcgagctgcgagagaccgatgccagcatcgccaacgccctccgccgcgtg
atgatctccgaggtcccaaccatcgctatcgatttggtggaaatcgaggtcaactcttcc
gtcttgaacgacgaattcatcgcccaccgcctaggtctgatccctctaatcagcgagcgc
gccatggccatgcgcttctcccgcgactgcgacgcctgcgacggcgatggccagtgtgag
tactgttccgtcgagtttcatcttcgcgcgaagtgcattaacgacactacgctcgatgtc
acctcgaaggacctctacagctcggaccacacagttgttcccgtcgatttctccgatgct
tcgtccacaatcgataacacggagtctaggggaatcataattgtgaagcttcgccgaggt
caagagttgattttgagagccatagcacggaaaggaattgggaaagatcatgccaaatgg
tcacctgcggcaactgtcactttcatgtatgaacctgagatctatatcaatgaagagtta
atggaaaccttgagcatggcggagaaacaagagtttgttgacagcagtcccacaaaagtg
tttgacattaacccccgcaatgggcaggtctatgttcacaatgctgagaattatacctat
gacgatgaagttctcaagaaagcagaagcaatggggaagcctggccttgttgagatccat
gccaaagaggacagtttcatattcacggtagagacaactggaggcataaaggcatcccaa
ttgttaatcaatgccatcgagatcctgaagcagaagctagatgctgttcgcttgtcagca
gacaccgtggaagctgacgagcagtttggcgagctgggagcacatatgcgtgggggctga
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