Salvia splendens (scarlet sage): 121748427
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Entry
121748427 CDS
T07627
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121748427
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121748427
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121748427
03036 Chromosome and associated proteins [BR:
sspl03036
]
121748427
Protein phosphatases and associated proteins [BR:
sspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121748427
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121748427
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121748427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
HEAT_EZ
Adaptin_N
CLASP_N
Cnd1
TAF6_C
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
121748427
NCBI-ProteinID:
XP_041998716
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Position
9:complement(9603202..9609294)
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AA seq
587 aa
AA seq
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MSMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGEEHANVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDSFIPLAKRLAAGEWFTARVSACGVFHIAYPSAPDTLKTELRSIYSQLCQDDMPMVR
RAAATNLGKFAATVEAAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTNLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILDPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIREAAANNLKRLAEEFGPEWAMQHIVPQV
LDMVTNPHYLYRMTVLQAISLLAPVMGSDITCSKLLPVIVNATKDRVPNIKFNVAKVLQS
MIPIVDQSVVEKTIRPSLVELSEDPDVDVRFFANQALQSIDHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggtggatgaaccactgtacccaatagcagtcctgatagatgagttaaagaat
gaggacattcagctacgattgaactccatacgtagactatccaccattgcacgtgcgctc
ggggaggagaggactagaaaggagttgattccgtttttgagtgagaacaatgatgacgat
gatgaggtgctgcttgctatggctgaagaattgggcgtcttcattccatatgttggagga
gaggaacatgctaacgtgctgctcccccctttagaaacactttgcaccgtggaggagacc
tgtgtgagagacaaagctgtagaatcgttgtgcagaattggatcacaaatgagggagagt
gatttggttgactcgtttattcctcttgcaaagagactggcagcaggcgagtggtttaca
gcccgtgtctcagcttgtggcgtatttcatattgcatatccaagtgccccggatacacta
aagacagaattaaggtcaatatacagccaattatgtcaagatgatatgcctatggtgaga
agagcggctgcaacgaacttgggaaagtttgctgctacagtggaagctgctcatctcaag
acagatataatgtctatgtttgaggacctcacacaagatgatcaagattctgttcgctta
ttggctgttgagggctgcgctgctcttggaaagttgttggagcctcaggattgtgttgcc
catattctgcctgtgattgtcaacttctcacaggataagtcttggcgtgttcgttacatg
gttgccaatcaattatatgagctttgtgaggctgtggggcctgaacctactaggacgaat
ttagttcctgcatatgtgcgcctgcttcgagataatgaagcagaagtgcgaatagcagct
gccggaaaagttacaaaattctgtcggattcttgatccagaacttgctatccagcatatt
ctgccctgtgtgaaggaattgtcatctgattcttcccaacatgtaagatctgctttggca
tctgtcattatggggatggctcctgtcttgggaaaggatgcaacaatcgaacaacttctt
cccatatttctctccctcttgaaagacgaattccctgatgttcgcctcaatatcattagc
aagttagaccaagtcaatcaggttataggaatcgatcttctatcccagtccttactacca
gccattgtcgagctggcagaagacagacattggagagtcaggcttgccatcatagaatat
atacctcttttggctagtcagttgggtgttggatttttcgacgacaagctcggtgccctt
tgcatgcagtggctgcaggacaaggtttactcgatccgagaagctgctgctaataatttg
aagcgtctggcagaggaattcggtccagaatgggcaatgcagcatatcgttcctcaggtc
ttggatatggtgacgaacccacactatttgtaccgtatgactgtgcttcaagcaatctcg
ctacttgctccggtcatgggttccgacataacgtgctccaaattattgcccgtcattgtc
aacgctaccaaggacagggtgcccaacatcaaattcaacgtggccaaggtgttgcagtcg
atgatccccatcgttgatcaatctgtggtggagaagactattcgccccagtttggtcgag
ctctcggaggaccctgacgtcgatgtccgtttttttgcgaatcaagcgctccagtcaatc
gatcatgtcatgatgtcgagctag
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