Salvia splendens (scarlet sage): 121748696
Help
Entry
121748696 CDS
T07627
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7 isoform X1
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03020
RNA polymerase
sspl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121748696
09124 Replication and repair
03420 Nucleotide excision repair
121748696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121748696
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121748696
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121748696
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
121748696
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121748696
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121748696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
121748696
NCBI-ProteinID:
XP_041999121
LinkDB
All DBs
Position
9:complement(20097460..20099789)
Genome browser
AA seq
220 aa
AA seq
DB search
MFFHMVLERNMQLHPRHFGRDLRDKLVTKLMKDVEGTCRLLNCDSTLMFFFNFLGIDVIE
REDSTIHLLCVYCTCYLCYYGSGHHGFVVAITGIDNVGKGLIRDGTGFVTFPVKYQCVVF
RPFKGEILEAVVTMVNKMGFFAEAGPVQVFVSNHLIPDDMEFQAGDIPNYTTYDGSVKIQ
KESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGANS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccacatggtattggagagaaacatgcaactacaccctcgtcattttggccgt
gatctccgggataagctcgtgaccaagctcatgaaagatgttgaaggcacttgcaggtta
ctcaattgtgattctacattgatgttttttttcaattttttgggcattgatgttatagaa
agagaggatagcacaattcatctattgtgtgtctattgtacttgttatttgtgttattat
ggcagtggtcaccatggatttgttgttgcaataactgggattgacaatgttgggaaaggg
cttattcgtgatgggaccggatttgttactttcccggtgaagtaccagtgtgttgtattt
cgaccttttaagggagagattctggaagctgttgttacaatggttaacaagatgggattt
tttgccgaggcaggtcctgtccaagtttttgtatcaaatcatttgatacctgatgatatg
gagttccaagctggtgatatcccgaattacactacttatgatggatctgtcaaaatacag
aaagaaagtgaagttaggctgaagataattggaactcgagttgatgctacagaaatcttt
tgcatcggcaccataaaagacgattttcttggtgtgatcagtgatccaggtgcaaactcc
tga
DBGET
integrated database retrieval system
