Salvia splendens (scarlet sage): 121750086
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Entry
121750086 CDS
T07627
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121750086
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121750086
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121750086
03036 Chromosome and associated proteins [BR:
sspl03036
]
121750086
Protein phosphatases and associated proteins [BR:
sspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121750086
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121750086
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121750086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
Cnd1
CLASP_N
Adaptin_N
TAF6_C
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
121750086
NCBI-ProteinID:
XP_042000476
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Position
10:complement(8581729..8586202)
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGEEHANVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDSFIPLAKRLAAGEWFTARVSACGVFHIAYPSAPDTLKTELRSIYSQLCQDDMPMVR
RAAATHLGKFAATVEAAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQNCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILDPELSIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIREAAANNLKRLAEEFGPEWAIQHIVPQV
LDMVTNPHYLYRMTVLQAISLLAPVMGSDITCSKLLPVIVNATKDRVPNIKFNVAKVLQS
MIPIVHQSVVEKTIRPSLVELSEDPDVDVRFFANQALQSIHQVVMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggtggatgaaccactgtacccaatagcagtcctgatagacgagttaaagaat
gaggacattcagctacgattgaactccatacgtagactatccaccattgcacgtgcgctc
ggggaggaaaggactagaaaggagttgattccgtttttgagtgagaacaatgatgacgat
gatgaggtgctgcttgctatggctgaagaattgggcgtcttcattccatatgttggagga
gaggaacatgctaacgtgctgctcccccctttagaaacactttgcaccgtggaggagacc
tgtgtgagggacaaagctgtagaatcgttgtgcagaattggatcacaaatgagggagagt
gatttggttgactcgtttattcctcttgctaagagactggcagcaggcgagtggtttacc
gcccgtgtctcagcttgtggcgtatttcatattgcatatccaagtgccccagatacacta
aagacagaattaaggtcaatatacagccaattatgtcaggatgatatgcctatggtgaga
agagcagctgcaacacacttgggaaagtttgctgctacagtggaagctgctcatctcaag
acagatataatgtctatgtttgaggacctcacacaagatgatcaagattctgttcgctta
ctggctgttgagggctgcgctgctcttggcaagttattggagcctcaaaattgtgttgcc
catattctgcctgtgattgtcaacttctcacaggataagtcttggcgtgttcgttacatg
gttgccaatcaattatatgagctttgtgaggctgtggggcctgaacctactaggacggat
ttagttcctgcatatgtgcgcctgcttcgagataatgaagcagaagtgcgaatagcagct
gccggaaaagttacaaaattctgtcggattcttgatccagaactttctatccagcatatt
ctgccctgtgtgaaggaattgtcatctgattcttcccaacatgtaagatctgctttggca
tctgttattatggggatggctcctgtcttgggaaaggatgcaacaatcgaacaacttctt
cccatatttctctccctcttgaaagacgaattccctgatgttcgcctcaatatcattagc
aagttggaccaagtcaatcaggttataggaatcgatcttctctcccagtccttactacca
gccattgtcgagctggcagaagacagacattggagagtcaggcttgccatcatagaatat
atacctcttttggctagtcagttgggtgttggatttttcgacgacaagctcggtgccctt
tgcatgcagtggctgcaggacaaggtttactcgatccgagaagctgctgctaataatttg
aaacgcctggcggaggaattcggtccagaatgggcaatacagcacatcgttcctcaggtc
ttggatatggtgacgaacccacactatttgtatcgtatgactgtacttcaagcaatctcg
ctacttgctccggtcatgggttccgatataacgtgctccaaattattgcctgtcattgtc
aacgctaccaaggacagagtgcccaacatcaaattcaacgtggccaaggtgttgcagtcg
atgatccccatcgttcatcaatctgtggtggagaagactattcgccccagtttggtcgag
ctctcggaggaccctgacgtcgatgtccgttttttcgcgaatcaagcgctacagtcaatc
catcaagtcgtgatgtcgagctag
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