Salvia splendens (scarlet sage): 121760974
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Entry
121760974 CDS
T07627
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03020
RNA polymerase
sspl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121760974
09124 Replication and repair
03420 Nucleotide excision repair
121760974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121760974
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121760974
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121760974
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121760974
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
121760974
NCBI-ProteinID:
XP_042012491
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All DBs
Position
2:11338731..11342931
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AA seq
288 aa
AA seq
DB search
MKFELRETDASIANALRRVMISEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLICDRA
MAMRFSRDCDGDGQCEYCSVEFHLRAKCINDSTLDVTSKDLYSSDHAVVPVDFSDASSTI
DNTESRGIIIVKLCRGQELILRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEELMETL
TMAEKQEFVDSIPTKVFDTNPLQWTVLKKAEAMGKPDFVEIQAKEDSFIFTVETTGGIKA
SQLLINAIEILKQKQDVVRLSADTVEADEQFGELGAHARGLCSTPENF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgagctgcgagagaccgacgccagcatcgccaatgcgctccgccgcgtcatg
atctccgaagtccccaccatcgctatagatttggtggaaatcgaggtcaactcttccgtc
ttgaacgacgaattcatcgcccaccgccttggcctcgtccctctcatctgcgaccgagcc
atggccatgcgcttctcccgcgactgcgacggcgatggccagtgcgagtactgctccgtc
gagtttcatctccgcgcgaagtgcattaacgactcaacgctcgatgtcacctccaaggac
ctatacagctccgaccacgctgttgttcccgtcgatttctctgatgcttcctccacaatc
gataatacagagtctcggggaattatcatagtaaagctttgtcgaggtcaggagttgatt
ttgagagccatagcacgcaaaggaattggcaaagatcatgcaaaatggtcgcctgcggca
actgtcactttcatgtatgaacctgaaatctatatcaatgaagagttgatggaaaccttg
actatggcggagaaacaagagtttgttgacagcattcccacgaaagtatttgacactaac
cccctgcaatggacagtgctcaagaaagcagaggcaatggggaaacccgactttgttgag
atccaagccaaggaagacagtttcatattcaccgttgagacaacaggaggcataaaagca
tcacaattgttaatcaacgccattgagatcttgaagcagaagcaggacgttgttcgcttg
tcagcagacactgtggaagctgatgagcagtttggtgagttgggagcacatgcgcggggg
ctgtgtagcaccccggaaaatttttga
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