Salvia splendens (scarlet sage): 121762023
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Entry
121762023 CDS
T07627
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
sspl03013
Nucleocytoplasmic transport
sspl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121762023
03008 Ribosome biogenesis in eukaryotes
121762023
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121762023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121762023
03009 Ribosome biogenesis [BR:
sspl03009
]
121762023
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121762023
03036 Chromosome and associated proteins [BR:
sspl03036
]
121762023
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121762023
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121762023
Pre-60S particles
121762023
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121762023
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121762023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
121762023
NCBI-ProteinID:
XP_042013691
LinkDB
All DBs
Position
13:6561767..6571908
Genome browser
AA seq
1071 aa
AA seq
DB search
MDAEKLRDLSQPMDVALLDATVAAFYGTGSKEQRTAADHILRDLQTNPDMWLQVVHILSS
TQSLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVKLSSDEISFRRERLYVNK
LNIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRAELIRATLATLHAFLSWIPLGYIFESPLLER
LLNFFHVPAYRNLTLQCLTEVAALSFGDFYNAEYVKMYAIFMVQLQNILPSNTNFVEAYA
NGTSEEQAFIQNLALFFTSFYKAHIRVLESSQENINLLLVGLEYLINISYVDDTEVFKVC
LDYWNSLVLELFEAHHNLDTPAGNMQMPMLSGMVEGLGSQLMQRRQLYAAPMSKLRQLMI
CRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLANLDHEDTEKQMLRKLS
KQLNGEDWTWNNLNTLCWAIGSISGSMGEEQENRFLVMVIRDLLNLCEVTKGKDNKAVIA
SNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVL
VQVGENEPFVSELLTTLPATIADLEPHQIHSFYESVGNMIQAEPDPDKRTEYLRRLMELP
NQKWAEIIGQAHQNVDFLKDPDVIRAVLNILQTNTCVASSLGTYFLTQITLIFLDMLNVY
RMYSELISTSIAQGGPYASRTSIVKLLRSVKRETLKLIETFLDKAEDQPHIGKQFVPPMM
DPVLGDYARNLPDARESEVLSLFATIINKYKGAMLEDVPKIFEAVFQCTLEMITKNFEDY
PEHRLKFFSLLRAIATHCFPALIRLSSEQLKLVMDSIIWAFRHTERNIAETGLNLLLEML
KNFQSSEFCNQFFRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGRLTEPL
WDVATVPYPYPNNGMFIQEYTIKLLSTSFPNMTAAEVTQFVKGLFESRADLPLFKNHIRD
FLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMVDS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggagaagctgcgtgatttaagccagccgatggatgtcgctctgctcgacgcc
accgtcgccgctttctatgggaccggatccaaggagcagaggacagctgcagatcacatc
ctacgagatttgcaaaccaatccagatatgtggcttcaagtggttcacatactatcaagt
acacagagtttgaataccaagttttttgctttacaggttctagaaggtgttattaaatat
agatggaatgcattgcctgttgaacaacgggacggcatgaagaactatatttctgaagtt
atagtgaagctttctagcgatgagatctctttccgacgcgagaggctttacgtcaataag
ttgaacattatattggtccagatcttgaagcatgagtggccagcccggtggagaagcttt
atccctgatctggttgcagcagcaaaaacaagcgaaactatttgtgagaattgcatggca
attctgaaacttcttagtgaagaggtgtttgacttctcaaggggtgagatgacccagcaa
aagattaaagagttgaaacaatcgttgaacagcgagttccagcttattcacgaactatgt
ttgtatgtattgtcggcatctcaaagagctgagcttatcagggctaccctggctacactg
catgctttcctttcctggattcctctaggatatatatttgaatcgccactgcttgaaaga
ctgctaaatttcttccatgtgcccgcttatcgcaatcttactctacagtgtctgacagag
gttgctgctcttagttttggggatttttataacgcggaatatgtcaaaatgtatgctata
ttcatggtgcaattacagaacatccttccatctaatacaaatttcgtagaggcttatgca
aatggcactagtgaggagcaggcatttattcaaaacttggcgttgttttttacatcattc
tacaaggctcacatacgagtcctcgaatcttcacaagagaacataaatcttctgcttgtt
ggtcttgagtatctcattaacatatcttatgtcgatgatactgaagtttttaaggtttgc
ttggactattggaactccttagttttggagctgtttgaagcacaccataacttggacact
cctgctggaaacatgcagatgcctatgctttcgggtatggttgaaggactaggctcccaa
ctcatgcagaggcgacaactatatgctgccccaatgtcgaagttaaggcaactaatgata
tgccgcatggcaaagcctgaagaagtcctcattgttgaggatgaaaatgggaatatagtc
cgtgaaactatgaaagataatgatgtgcttgttcagtataagataatgagggaaacattg
atctatttggcaaaccttgatcacgaggatactgaaaaacagatgctcaggaaactgagt
aaacaactaaatggagaggattggacctggaacaatctcaataccttgtgttgggctatt
ggatctatttcagggtcgatgggagaagagcaggagaatagatttttggtgatggtcatt
cgtgatttattgaatctctgtgaagtcaccaaggggaaggacaacaaagctgtcattgct
agtaatatcatgtatgtggttgggcagtaccctagatttttaagggcacactggaagttt
ttgaaaactgttgtgaacaagttgtttgagttcatgcacgaaactcatccaggagttcag
gacatggcatgtgacacattcttaaaaattgttcagaagtgcaagcgtaaatttgtcctt
gtacaggttggagagaacgaaccatttgtttcagaacttttaactactcttccagcgacc
attgcagatcttgaaccccatcagatccattcattttatgaatctgttggcaatatgatt
caagcagaacctgatcctgacaagaggactgaatatttacggaggttgatggagcttcct
aaccagaaatgggctgaaatcattggccaagcacaccagaatgtggatttcttgaaagac
ccagatgttataagagcagtgcttaatatattacagacaaatacctgtgttgcaagctcc
cttggaacatatttcctgacacagatcactctaattttcttggatatgctcaatgtgtac
agaatgtacagtgagcttatatcgaccagtattgcccaaggagggccttacgcttccaga
acatctattgtgaaacttctgcgctctgtgaagagggaaaccctaaagcttatcgagaca
tttcttgacaaagctgaagatcaaccacatattggaaaacagttcgtgcccccaatgatg
gatcctgtgcttggtgattatgcccgaaacttgcccgatgcaagggagtcggaagttctc
tctctttttgccaccataataaataagtataagggggcaatgcttgaagacgttcctaag
atttttgaagctgttttccagtgcactctagagatgataacaaagaattttgaagactat
ccagagcatcggctgaagttcttttcacttcttcgagcaattgctacacattgttttcct
gctttgattcgtctgtccagtgagcaactgaagcttgtgatggattcaatcatttgggct
ttccgtcacactgagcgtaacattgctgaaactggactcaaccttctattagagatgcta
aaaaactttcagtcatccgagttctgtaatcagttcttcaggacttactttttgacaatc
gaacaagaaatatttgctgttttgacggacacatttcataagccaggttttaagttgcat
gtcttggtgttacagcacctattctgcctggttgaatctggtaggttgactgagcctctg
tgggatgttgccactgttccatatccttatccaaacaatggcatgttcattcaggaatac
acaattaaacttttgagtacatccttccccaacatgacagctgctgaggtgacacaattt
gtgaaagggctttttgagtctagagcagatttgcccttgttcaaaaaccatataagagac
ttccttgtgcaatctaaagaattttcagctcaggataacaaagatctttatgctgaggaa
gctgctgcccaaagagagagagaacgccaacgcatgctctcgatacctggacttatagct
cccaatgagatacaagatgagatggtcgactcataa
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