Salvia splendens (scarlet sage): 121798366
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Entry
121798366 CDS
T07627
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
sspl03013
Nucleocytoplasmic transport
sspl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121798366
03008 Ribosome biogenesis in eukaryotes
121798366
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121798366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121798366
03009 Ribosome biogenesis [BR:
sspl03009
]
121798366
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121798366
03036 Chromosome and associated proteins [BR:
sspl03036
]
121798366
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121798366
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121798366
Pre-60S particles
121798366
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121798366
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121798366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
121798366
NCBI-ProteinID:
XP_042053265
LinkDB
All DBs
Position
4:complement(8627053..8641715)
Genome browser
AA seq
1083 aa
AA seq
DB search
MAAEKLRDLSQPMDVALLDATVAAFYGTGSKEERAAADHILRDLQHNPDMWLQVVHILSS
AQNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISDVIVKLSSDEVSFRRERLYVNK
LNIILVQILKHEWPARWRSFIPDLVAAAKSSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFKLIHELCLYVLSASPRAELIRATLATLHAFLSWIPLGYIFESPLLET
LLKFFPVPAYRNLTIQCLTEVAALSFGDFYNMEYVKMYSIFMVQLQAIVPSTTNFVEAYA
NGNSEEQAFIQNLALFFTSFYKCHIRVLESVQENITILLVGLEYLINISYVDDIEVFKVC
LDYWNSLVSELFDSNHNLDSPAGVANMMGLQMPMLLGMVDGKGSQLLQRRQLYAGPMSKL
RLLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLAHLDHEDTEKQM
LTKLGKQLIGEDFTWNNLNTLCWAIGSISGSMAEEQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCR
RKFVIVQVGEKEPFVSELLTTLLTTIVDLEPHQIHSFYESVGNMIQAETDPLRRGEYLQK
LMELPNQKWGEIIGQARQSVDFLKDQDVIRAVLNILQTNTSVASSLGMYFMPQISMIFLD
MLNVYRMYSELISTSIAQGGPHASRTSIVKLLRSVKRETLKLIETFLEQAETFTDKAEDQ
QHIGKQFLAPMMDHVLGDYARNLPDARESEVLSLFATIINKYKGTMIENVPRIFEAVFQC
TLEMITKNFEDYPEHRLKFFSLLRAIAAHCFPALVHLSSEQLKLVLDSIIWAFRHTERNI
AETGLNLLLEMLQNFQGSEFCNQFHRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF
SLVESAALTEPIWDTATVSYPYANNGIFVREYTVKLLSSSFPNMTATEVTQFVNVLFESK
GDISSFKDHIRDFLVQSKEFSAQDNKDLYAEEAAAQREKERQRMLSIPGLIAPNEIQDEM
VDS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaaaagcttcgggatttgagtcagcccatggatgttgctctgctcgacgcc
actgtcgctgctttctatggaaccggatctaaagaggagagggctgctgcagaccatatc
ttgcgtgacttgcaacataacccagatatgtggcttcaagtggtccacattttatccagt
gctcagaatctgaacacaaaattttttgctttacaggttttggaaggtgttattaagtac
agatggaatgctttacctgtagaacaaagagatggcatgaaaaactatatttctgatgtt
atagttaagctttcgagtgacgaagtttctttccggagggagaggctttatgtcaataaa
ttaaacataatattggttcagatattgaagcatgagtggccagctcgatggcgtagcttc
atacctgacttggttgcagcagcaaaatcaagtgaaaccatctgcgagaattgcatggcc
attctaaaacttctaagtgaggaggtcttcgatttttcaaggggtgaaatgactcaacag
aagattaaagagttgaaacaatctttgaacagtgaattcaagctcattcacgagttatgc
ttgtatgtgttgtctgcatccccaagagctgaactcatcagggctaccttggcaacatta
catgcttttttgtcctggattcccttgggctatatatttgaatcaccactgcttgaaact
ctattgaaattctttcctgtgcctgcatatcgcaatctcactattcagtgtctgactgag
gttgctgctcttagttttggggacttctacaatatggagtatgtcaaaatgtattctata
ttcatggtgcaattacaggcaattgttccatcgaccaccaactttgttgaggcatatgca
aatggcaatagtgaggagcaggcatttattcagaatttggcactgtttttcacatcattc
tacaagtgtcatatacgagtgctagagtctgtgcaagagaatataactatactactagtg
ggccttgagtatctaattaatatctcatatgtggatgacattgaagtttttaaggtttgc
ctggattattggaattctttagtttcggagctgtttgattctaatcacaatctggatagt
cctgccggggttgcaaacatgatgggactgcagatgccaatgcttctgggtatggttgat
ggaaaaggatcacaactcctgcagaggcgtcaactttatgctggtccaatgtcaaagttg
agattactgatgatatgtcgcatggcgaagccagaagaggttctcattgttgaggatgaa
aatgggaatatagttcgtgagacaatgaaagataatgatgttctagtgcagtataagata
atgagggagacactgatttacttggctcatcttgatcacgaggatactgagaaacagatg
ctgacaaagttgggtaaacaacttattggagaggattttacctggaacaatcttaataca
ctctgttgggccattggatctatttctgggtcaatggcagaggagcaggaaaacaggttt
ctggtgatggtaatccgtgatttgttaaacctttgtgagatcactaaggggaaggacaat
aaagctgtcatagccagtaacataatgtatgtagttggtcaatacccacgatttttgagg
gctcattggaagttcttgaaaactgttgtgaacaaattgtttgaattcatgcatgagacc
cacccaggggttcaggacatggcatgtgatacattcttgaaaattgtccaaaaatgcagg
cgcaaatttgtcatcgtgcaggttggagaaaaagagccatttgtttcggaactattaaca
acacttctgactactattgttgatcttgagcctcatcaaattcattccttttatgaatct
gttggtaatatgattcaagcagaaactgatcccctcaggagaggtgaatacctgcagaag
ctgatggaacttcctaatcagaaatggggtgaaataattggacaggcacgccagagcgta
gatttcttgaaagatcaagatgtgatccgcgcggtgcttaatatcttgcagacaaatact
agtgttgctagctctcttgggatgtattttatgccacagatttccatgatctttttggac
atgctcaatgtttacagaatgtacagtgagcttatatcaaccagtattgcccaaggaggg
ccccatgcttctcggacatctattgtgaaactcttacgttcagtcaagagggaaacatta
aagctcattgagacatttttagaacaagctgagacatttacagataaagctgaagatcag
caacatatcggaaagcagtttttggctccaatgatggaccatgtgctcggtgactatgct
cggaatttgcctgatgcgagagagtcagaagttttatcactctttgcaaccataataaat
aagtacaagggaacaatgattgagaacgttcctcgaatatttgaagctgtattccagtgt
actctagagatgataacaaagaattttgaagactatcctgagcatcgactgaagttcttt
tcactgcttagagctattgctgcgcattgttttcctgccctagtgcacttgtcaagtgag
caattaaaacttgttctagattctatcatttgggctttccggcatactgaacgaaatata
gcagagactggtctcaacctattgttggaaatgctgcaaaattttcagggttctgagttt
tgtaaccagttccaccggacttactttttaacaatagagcaagagatatttgctgttttg
acagacacattccacaagccgggttttaagttgcatgtactggtgctgcaacacttattc
agcctggtagaatcagctgcgttaactgaacctatatgggatactgcaacagtttcttat
ccttatgcaaataatggcatatttgtccgtgagtataccgtaaaacttttgagctcatcg
tttccgaacatgacagcaacggaggttacccaatttgtcaatgtactttttgagtcaaaa
ggcgatatttcttcattcaaagatcacatacgagattttcttgtccaatcaaaagaattt
tcagctcaggacaataaagatctttatgctgaggaagctgctgcccagagagaaaaagag
cgacagcgcatgctatcaattccaggactcattgcacccaacgagatacaagacgagatg
gtggattcatga
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integrated database retrieval system
