KEGG   Salvia splendens (scarlet sage): 121804539
Entry
121804539         CDS       T07627                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121804539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sspl03021]
    121804539
Enzymes [BR:sspl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     121804539
Transcription machinery [BR:sspl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     121804539
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 121804539
NCBI-ProteinID: XP_042060057
LinkDB
Position
5:complement(9172532..9179614)
AA seq 1214 aa
MDGWDYIDEAGPSSINEKLTNGSRPMEFDDDLDFNCSESEDEADCALQELDKSFLKGFCK
KASIAFFEQFGLISHQINSYNEFVKHGIQKVFDSVGEITIEPGYDPTKRGDGEWKRAKLR
FGKVMLDHPTLWTGEKFSSTDGGKEFLELLPRHAHLQNMTYSSRIKVETHLQVYTESPSR
SDKFKTGVDIVVEKTILNEYQTDINFGRLPVMVKSDLCWMSRPEPDGKERRDCEFDQGGY
FVIKGAEKTFIAQEQICLKRLWVAKDPTWTIAYRPVAKRTRVYIKLVPNVEHLKAGDKIL
TVYFYAAEVPIWLLFFALGVPNDREVVKLIGLDTEEDSTIANILMPSIHDADKKFEGFRK
AGNAIGHIMKLMQGSKFPPTESLEVLIHTYLFPNLRSQRQKASFLAYMVKCLLDAYRGRR
KVDNRDDFRNKRVELAGELLERELSVHIKHAERRMVKAIQRDLYKDREVQSIDHYLDASI
ITNGLSRAFSTGAWVHPFKRMERMSGVVANLRRTNSLQAVCDMRRTRQQVSYTGRVGDAR
YPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSNNILGQESILKKFLECGMENLVDDDC
CLLGGRHKVFLDGDWVGVCKDSSSFVAKLRHKRRKMEVPQQIEIKRDKHQDEVRIFADAG
RILRPLFVVQNLKKIKDLKGDFLFQSLLDNGIVEFIGPEEEEDCQTAWGIDYLFTAELDN
PPVKYTHCEFDSSFLLGLSCGIVPFANHDHARRVLYQSAKHSQQAMGYSTTNPSIRVDTN
SHQLYYPQRPLFRTMLSDCLGKSRYSEHHKGMMPRPDFFNGQSAIVAVNVHLGYNQEDSL
VMNRASLERGMFRTEHVRSYKAEVENSEAVGKRAKTDELVSFGKMQSKIGRVDSLDDDGF
PFIGANLQTGDIVIGKYAASGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRS
PCLGDKFSSMHGQKGVLGFLESQENFPFTVEGIVPDIVINPHAFPSRQTPGQLLEAALGK
GIALGGGLKYATPFSTPSVEDITSQLHRLGYSRWGGERMYDGRTGEKVETLIFMGPTFYQ
RLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFT
LSDSSQMHICRKCKNVAGVIQRTVVGGRRVRGPYCRFCEAVEDVVRVNVPYGAKLLCQEL
FSMGISLKFETELC
NT seq 3645 nt   +upstreamnt  +downstreamnt
atggacgggtgggattatatagatgaagcaggacctagcagcataaacgagaagcttact
aatggttcgagaccgatggaatttgatgatgatctagacttcaactgttctgaatctgaa
gatgaggcggactgtgccctgcaagaactggacaaaagcttcctgaaaggtttctgtaag
aaggcttcgatagcattttttgagcagtttggtttaattagccaccagataaattcctat
aatgaatttgtcaagcatgggatccaaaaagtctttgactctgttggggagattacaatt
gaacctggatacgaccctactaaaaggggagatggtgagtggaagcgtgcaaaactgagg
tttggaaaagtcatgcttgatcacccgacattgtggactggtgagaagttttcatcgact
gatggtggtaaagagtttttggagcttttgccgaggcatgctcatcttcagaatatgacc
tattcatccaggatcaaagttgagactcatcttcaggtgtatacagaaagtccatctaga
agtgacaaattcaaaactggtgtggatatagttgtagagaagacaatactgaatgagtat
cagactgatattaactttggcagactccctgtcatggtgaaatcggacttgtgctggatg
agtagacctgaacctgatggtaaagaaaggagagattgtgaatttgatcaaggaggttac
tttgttatcaagggggctgagaagacattcattgcccaggagcaaatatgcctcaaaagg
ttgtgggtggctaaagatcctacctggaccattgcatatcgtccagtcgcgaaaaggaca
agagtgtatataaagttagttccaaatgtggaacatttgaaagccggagacaagatcctt
actgtatacttttacgccgcagaggttcctatttggctcttgttctttgctttgggtgtt
ccaaatgatagagaggtggtcaagctgattggtctggacactgaggaggactctacaatt
gcaaacatactcatgccatcaatacatgacgctgataagaaatttgaaggtttccgcaag
gctggcaatgcaatagggcatatcatgaagctgatgcagggcagtaagtttccacctaca
gaatctttggaggttttaatccatacctatctctttcccaaccttaggagccagcggcag
aaagcttcttttcttgcgtatatggtcaagtgcctgctggatgcctacagagggcgccgc
aaagttgacaacagagatgattttaggaacaagagggtggagttggcaggtgaacttctt
gaacgagaactttccgtgcatatcaaacatgcggagaggcgaatggttaaggcaatacag
agagacctctacaaagatagagaggtgcagtccatcgaccactacctggatgcctcgatc
atcactaatggtctttccagagccttttcaactggagcgtgggtgcacccttttaagaga
atggaaaggatgtctggtgtagttgctaatctcaggcgaacaaattcattgcaggcagtg
tgtgatatgagaagaactcggcagcaggtctcatacacaggccgggttggtgatgctaga
tacccgcacccatctcactggggtaaggtttgctttctctctacaccagatggagaaaat
tgtggcctggttaagaatctggccagcctgggtcttgtcagtaataatatactgggacaa
gaaagcatccttaaaaaatttcttgagtgtggaatggagaacttggttgatgatgattgt
tgtttgctcggtggaaggcacaaagtttttctggatggagattgggttggagtgtgcaaa
gattcgtcatcatttgttgctaagctgagacacaagcgtcgcaaaatggaagtacctcag
cagattgagatcaaaagagataagcatcaggatgaagtgcgtatatttgctgatgctgga
aggatactgcgccctctctttgttgtccagaacttaaagaagattaaagatttgaaagga
gactttttatttcagtcgcttctggataatggcatagttgagttcatcggaccagaggag
gaagaagattgtcaaactgcgtggggaattgactacctgttcactgctgagttagataac
ccacctgtgaagtacacccactgcgagtttgatagttcattccttctaggtttaagctgt
gggatagttccttttgccaatcatgatcatgctaggagagttctttaccaatctgccaag
cactctcagcaagccatggggtactcgaccacaaaccccagcattcgagttgatacaaat
tctcaccagctatactatccccaaaggcctcttttccgaactatgctatcagattgccta
gggaagtcgaggtactctgaacaccacaaggggatgatgccaaggcctgatttcttcaac
ggccagagtgctattgtggctgtcaatgtccatcttggatacaatcaagaagattctctc
gtgatgaaccgtgcttctttagagcgtggcatgttcagaactgaacatgttaggagttat
aaagctgaagtcgaaaattcagaagcagtggggaaaagggccaagacggatgagcttgta
agttttggcaagatgcagagcaagattgggcgtgttgacagccttgatgatgacggcttt
ccctttattggagcaaatctccaaactggtgacatagtcatcggtaagtatgctgcttcg
ggggttgatcatagcatcaagctcaagcatacagaaaggggcatggttcaaaaggttgtg
ctgtcagccaatgatgaaggaaagaactttgcggttgtatctttgagacaggttcgttct
ccatgccttggggacaagttttctagcatgcacgggcagaaaggtgttctggggtttctg
gagtctcaggagaactttccttttacagtagaaggaatagttccagacattgtgataaac
ccacatgcatttccttctcgacaaacgcccggacaacttttagaggctgccctaggtaaa
gggattgcacttggtggtggactaaaatatgcaaccccattttccactccttctgttgaa
gatataacgtcccaacttcacaggctcgggtattcccgttggggaggggaaagaatgtac
gatggacgtacaggtgaaaaagtcgaaactcttattttcatgggtccgacattctaccag
cgtctcacacatatggctgaggacaaggtgaagttcaggaacaccgggccggtgcaccct
cttactcgtcagcccgtggctgacaggaagcgtttcggtggtatcaagttcggtgagatg
gaacgagactgcctcatagcccatggtgcagcagccaacctgcacgagcggctgttcacc
ctcagtgattcgtctcagatgcacatatgcaggaagtgcaagaatgtggcgggtgtgatc
cagcgaacggtggttggtggtcggagggtccgtgggccctattgtcgattctgtgaggct
gtcgaagatgtggtgagagtgaatgtgccttatggtgctaagctgctctgccaggagctc
ttcagcatggggatttcactcaaatttgagactgaattgtgctga

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