Streptomyces spinosirectus: LXH13_10485
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Entry
LXH13_10485 CDS
T08958
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03030
DNA replication
sspn03410
Base excision repair
sspn03420
Nucleotide excision repair
sspn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LXH13_10485 (polA)
03410 Base excision repair
LXH13_10485 (polA)
03420 Nucleotide excision repair
LXH13_10485 (polA)
03440 Homologous recombination
LXH13_10485 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspn03032
]
LXH13_10485 (polA)
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_10485 (polA)
Enzymes [BR:
sspn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LXH13_10485 (polA)
DNA replication proteins [BR:
sspn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LXH13_10485 (polA)
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LXH13_10485 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LXH13_10485 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UIR17435
LinkDB
All DBs
Position
complement(2255590..2258316)
Genome browser
AA seq
908 aa
AA seq
DB search
MAEKASKKTETTADGARPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEEPTHFAVAFDVSRKTWRSEEFTEYKANRSKTPDEFKGQVELIGELLDAMHASRF
AVPGFEADDIIATLATQAEAAGFEVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERVEEVKG
KAGQNLRDHLESVKLNRRLTELERNVELPKSVADLAREPYDRKAVSLVLDTLEIRNPSLR
ERLFGVDPGAEEAEVTPIATDGVELDGAVLGTGELAPWLAEHGGEPLGVATVDTWALGTG
SVAEVALAAADGAAGWFDPSQLNEADEKAFAAWLADAGRPKVFHNAKSAMRVFAEHGWSI
AGVRMDTALAAYLVKPGRRSFDLDALSLEYLHRELTPAATADGQLAFGTDDGAEAEALMV
QARTVLDLGEAFEGRLAEVGAADLLRDMELPTSALLARMERHGIAADRAHLEAMEQMFAG
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELALPKTKKTKTGYTTDADALAWLAAQTD
NELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIEAFVSGEDLHTTAASQV
FAVEPAAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAAEARGLMDAYFERFGGVRDY
LRRAVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
KVDGALREAGLTSRMLLQVHDEIVLEIAPGERATAEEIVRREMSDAVHLNVPLGVSVGVG
TDWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagaaagcatcgaagaagaccgagacgaccgccgacggcgcgcgaccccgcctg
atgctcatggacgggcactcgctggcctatcgcgcgttcttcgcgctgcccgcggagaac
ttcaccaccgcgacaggacagccgacgaacgcgatctacggcttcgcgtcgatgctcgcc
aacaccctgcgcgacgaggagcccacgcacttcgcggtggccttcgacgtctcccgcaag
acctggcgctccgaggagttcacggagtacaaggcgaaccgctccaagaccccggacgag
ttcaagggccaggtcgagctgatcggcgagctcctcgacgccatgcacgcgtcgcggttc
gcggtccccggcttcgaggccgacgacatcatcgccaccctcgccacccaggccgaggcg
gccggcttcgaggtcctcatcgtcaccggtgaccgcgactccttccagctggtcagcgag
cacacgacggtgctgtacccgacgaagggcgtctccgagctcacccgcttcaccccggag
aaggtcttcgagaagtacggcctgacgcccgcgcagtaccccgacttcgccgccctgcgc
ggcgacccgtccgacaaccttcccggcatccccggggtgggcgagaagaccgccgcgaag
tggatcaaccagttcggttcgttcgcggagctggtcgagcgcgtagaggaggtcaagggc
aaggccgggcagaatctgcgcgaccacctggagagcgtcaagctcaaccgccgcctcacc
gagctggagcgcaacgtcgagctgcccaagtccgtcgccgacctcgcgcgcgagccgtac
gaccgcaaggccgtctcgctggtcctggacaccctggagatcaggaacccctccctgcgc
gagcggctcttcggtgtggaccccggcgccgaggaggccgaggtcacgccgatcgcgacc
gacggcgtggagctggacggcgcggtgctcggcacgggcgagctggccccgtggctcgcg
gagcacggcggcgaaccgctgggcgtcgccaccgtcgacacctgggcgctcggcaccggc
tcggtcgccgaggtcgccctcgccgccgccgacggagcggccggctggttcgacccctcg
cagctgaacgaggccgacgagaaggcgttcgccgcctggctcgccgacgccggccggccg
aaggtcttccacaacgccaagagcgcgatgcgggtcttcgccgagcacggctggagcatc
gccggggtccgcatggacaccgcgctcgccgcctacctcgtcaagccgggccgccgctcc
ttcgacctggacgcgctgtccctggaatacctgcaccgcgagctgacccccgccgccacg
gccgacggccagctcgccttcggcacggacgacggcgccgaggccgaggccctgatggtc
caggcccgcacggtgctcgacctgggcgaggccttcgagggccgcctcgcggaggtcggc
gccgcggacctcctgcgggacatggagctgccgacgtccgccctgctggcccgcatggag
cggcacggcatcgcggccgaccgggcccacctggaggccatggagcagatgttcgcgggc
gccgtccagcaggcggtgaaggaggcgcacgcggcggcggggcacgagttcaacctgggc
tcgcccaagcagctgcaggaggtcctgttcggcgagctggcgctgcccaaaaccaagaag
accaagaccggttacaccacggacgccgacgccctggcctggctcgccgcccagacggac
aacgaactgccggtgatcatgctccgccaccgcgagcaggcgaagctgcgggtcacggtc
gagggcctgatcaagacgatcgcggcggacggccgtatccacacgacgttcaaccagacg
gtggccgcgacgggccggctgtcctccacggacccgaacctgcagaacatccccgtccgc
accgacgagggccgggccatccgccgcggattcgtcgtcggggagggcttcgagtccctg
atgacggccgactacagccagatcgaactgcgcgtgatggcgcacctctccgaggacgag
ggcctgatcgaggcgttcgtctccggggaggacctgcacaccacggcggcatcgcaggtg
ttcgcggtggaacccgccgcggtggacgcggagatgcgccgcaagatcaaggccatgtcg
tacggcctggcctacgggctgtcggcgttcggcctgtcccagcagctgaacatcgaggcg
gcggaggcgcgcggcctgatggacgcctacttcgagcgcttcggcggcgtccgggactat
ctgcgccgggccgtcgacgaggcccgggccacgggatacacggcgaccctgttcggccgc
cgccgctatctccccgacctcaacagcgacaaccgccagcgccgcgaggcggccgagcgc
atggccctgaacgcacccatccagggcaccgccgcggacatcgtcaagatcgccatgctc
aaggtcgacggcgccctccgcgaggccggcctcacctcccgcatgctcctccaggtccac
gacgaaatcgtcctggagatcgcccccggcgaacgcgcgaccgccgaggagatcgtccgc
cgcgaaatgtccgacgccgtccacctgaacgtccccctgggcgtctcggtgggagtgggg
accgactgggagtcggcggcgcactag
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