Solanum stenotomum: 125842440
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Entry
125842440 CDS
T08385
Name
(RefSeq) cyclin-dependent kinase D-3-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03022
Basal transcription factors
sstn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125842440
09124 Replication and repair
03420 Nucleotide excision repair
125842440
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sstn01001
]
125842440
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125842440
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125842440
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125842440
Enzymes [BR:
sstn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
125842440
2.7.11.23 [RNA-polymerase]-subunit kinase
125842440
Protein kinases [BR:
sstn01001
]
Serine/threonine kinases: CMGC group
CDK family
125842440
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125842440
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
125842440
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125842440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Seadorna_VP7
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
125842440
NCBI-ProteinID:
XP_049377689
LinkDB
All DBs
Position
10:55765228..55773299
Genome browser
AA seq
419 aa
AA seq
DB search
MSEVEKLLAMNRKAADRYLKREVLGEGTYGVVYKAIDTKSGQVVAIKKIRLGKQKEGVNF
TALREIKLLKELKDPSVIELIECFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSY
IQMTLKGLAFCHKKWVLHRDMKPNNLLIGPDGQLKLADFGLARIFGSPDRRFTHQVFARW
YRAPELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGNSDIDQLGKIFAAFGTPKPSQW
HDMVYLPDYVEYQYVPGQPFKTLFPTATDDCLDLLSKMFTYDPKARISAQQALEHRYFSS
GPPPTEPALLPRPPPKREPGNPKVSDLNPHDGPVVLSPPRKSRRVMPHREGFEANVHPEK
MEDHENEIRHSAGERSEQVPMSLDFSVFGMKPPTRPTINSADRSHLKRKLDLEFQPEEE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagtggagaaattgttggctatgaataggaaagctgcagatcgttatctgaag
cgagaagttcttggtgaaggtacttatggtgttgtttacaaggctattgatacgaagagt
ggccaggttgttgctatcaagaaaattcgtcttgggaaacagaaggaaggggtgaatttt
actgccctgagggaaatcaaattattgaaagagctgaaggatcccagtgttatcgaattg
attgagtgcttcccacacaaaggaaacttgcaccttgtgtttgagttcatggagacagat
cttgaggctgtgattcgtgataggaatatcttcctctcacctgcggatataaaatcttat
atccagatgacattaaaaggtcttgctttttgtcacaagaaatgggtcttgcatagagat
atgaaaccaaacaatttactgattggacctgatgggcagcttaagcttgctgactttgga
ttagcacgtatatttggtagccctgacagaagattcacacatcaggtttttgcccggtgg
tacagagcaccggagttattgtttggtgcgaagcagtatggacctggagtagatgtttgg
gccgctgcatgtatctttgcagagcttctcctgcggcgaccatttttgcagggaaacagt
gatattgatcagctagggaagatttttgcggcctttgggaccccaaagccttcacagtgg
catgatatggtctacttgccggattatgttgagtaccaatatgtccctggacagccattc
aaaacactgtttccaacggctactgatgattgcctggatcttctgtcaaagatgtttact
tacgatccaaaagctaggatctcagcacagcaagcattggagcataggtacttctcatca
ggacctccacctacggaaccagctctgcttccaagacctccccctaagcgagagcctgga
aatcctaaggtgtcagatctcaatccacatgatggtcctgtggtattgtctccaccaaga
aagtcaagaagagtgatgcctcatcgcgaaggattcgaggcaaatgtgcatccagaaaag
atggaggaccatgaaaatgagatccgacattctgctggtgagaggagtgaacaagtaccc
atgtcactggatttctcagtctttgggatgaaaccacctactagaccgaccattaacagc
gctgacagatcgcatttgaagaggaaattagatcttgaattccaacccgaagaggaataa
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