Solanum stenotomum: 125849547
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Entry
125849547 CDS
T08385
Name
(RefSeq) ribosomal RNA small subunit methyltransferase, mitochondrial
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125849547
Enzymes [BR:
sstn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
125849547
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
125849547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
PrmA
UPF0020
Ubie_methyltran
MTS
Methyltransf_4
CMAS
PCMT
Methyltransf_18
Methyltransf_23
GidB
DREV
BpsA_C
tRNA_U5-meth_tr
Methyltransf_15
Cons_hypoth95
Met_10
Methyltransf_28
Motif
Other DBs
NCBI-GeneID:
125849547
NCBI-ProteinID:
XP_049385596
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Position
12:42126539..42128670
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AA seq
388 aa
AA seq
DB search
MLDRIKILSSKLIISQHFLRRSFRTKSTRRFNNVKDEDEEYNKVRRKTENEEAQIYLLKG
RGQHLLMNPRVLNSIVQKSNILPTDTVLEIGPGTGNLTLKLLEVAQKVIAIEIDKRMVEI
LHKRVSERGLQDRLTVICQDALKTEFPQFDLMVANIPYGISSPLVAKLVYGKNSYRSGTL
LLQKEFARRLLANPGDSEFNRLAVNVKLVADVEFVMNVSKKDFLPCPKVDSSVVMIYPKT
EIPEVDYEEWCAFTRTCFTKKNKTLGAIFKQKRMLVELMKLQETKGDEENNTLYSDYHVN
DIEDEDGLSNEDNVNFSPVMGKDLNLFREIINDILRSGGFEDKRPSKLSHKELLDLLSLF
NRARIRFHGQVNLKDESDAELASTFGPL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatcgtatcaaaattttgtcgagcaaactaatcattagccaacattttctccgg
cgaagttttcgtacgaagtcgactcgccgtttcaacaatgtcaaagatgaagatgaagaa
tataacaaagtccgaagaaaaactgaaaatgaagaagcacaaatttatttgcttaagggt
agaggtcaacatcttctcatgaatcctcgagtccttaattccattgtccaaaagtccaac
atacttccaactgataccgttctagaaattggaccaggcaccgggaatctcaccctgaag
ctgctagaagtcgcccaaaaagtcatagccatcgaaattgacaaacgtatggtagagatt
cttcacaagcgcgtctctgaacgaggacttcaagaccgtttaactgttatatgccaagat
gctttaaagactgagtttccacagtttgatcttatggttgccaacatcccttatggaatt
tcctcgcctctggttgctaaattagtttacggaaagaactcatacaggagtgggacacta
ttgttgcagaaagaatttgctaggaggctattggcaaatccaggggattcagagtttaat
agattagctgtgaacgtgaagctggtggctgacgtagagtttgtcatgaatgtgagcaag
aaggactttttgccatgtccaaaggttgattcttctgttgtgatgatatatcctaaaact
gaaattccagaggtggactatgaagaatggtgtgcgtttacgagaacttgcttcaccaag
aaaaataaaacattgggtgcaatctttaagcagaaaagaatgttggtggagttaatgaag
ctgcaagaaaccaaaggagatgaagagaataatacattgtacagtgattatcatgttaat
gatatcgaagatgaagacgggctgagcaatgaagacaatgttaatttctctcccgttatg
gggaaggacctaaatttgtttagagagataatcaatgacattttaagatccggtggattt
gaagataagaggccttcaaagctctcccacaaggagctactggacttgctttctttattc
aatcgagctaggatacgttttcatggtcaagtaaatctcaaggatgaaagtgatgccgaa
cttgcttctacatttggtccattatag
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