Solanum stenotomum: 125854226
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Entry
125854226 CDS
T08385
Name
(RefSeq) ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
sstn
Solanum stenotomum
Pathway
sstn02010
ABC transporters
sstn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125854226
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125854226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sstn02000
]
125854226
Enzymes [BR:
sstn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
125854226
Transporters [BR:
sstn02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
125854226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_16
SMC_N
nSTAND1
AAA_22
FtsK_SpoIIIE
Mg_chelatase
AAA_18
Motif
Other DBs
NCBI-GeneID:
125854226
NCBI-ProteinID:
XP_049389665
LinkDB
All DBs
Position
2:19365927..19391655
Genome browser
AA seq
1344 aa
AA seq
DB search
MPSLQLLQLTEHGRGLLASKRKALLLTTGIIVAGGTAAAYMQSRRTYKGHDSTQCDGVND
GIIEPNKQTRKGNSVKKSRQKKGGLKSVKVLAAILLSRMGRMGTRDLLALVATVVLRTAV
SNRLAKVQGFLFRAAFLRRVPMFFRLILENILLCFLQSALHSTSKYITGTLSLRFRSILT
RLIHAQYFQDMVYYKLSHVDGRITNPEQRIASDVPRFSRELSDLVQEDLIAVTDGLLYTW
RLCSYASPKYLFWILAYVLGAGLTIRNFSPPFGKLISKEQQLEGEYRQLHSRLRTHAESI
AFYGGETREDFHIQQKFKTLVRHMKAVLHEHWWFGMIQDFLHKYLGATVAVVLIIEPFFS
GNLRPDASTLGRAEMLSNLRYHTSVIISLFQALGTLAISSRRLNRLSGYADRIHELMIIS
RDLGGRNASSIQSNGSSNYVTEANYIEFDGVKVVTPTGNVLVEDLSLRVESGSNLLITGP
NGSGKSSLFRVLGGLWPLVSGHIVKPGIGSDLNKEIFYVPQRPYTAIGTLRDQIIYPLTA
DQEVEPLTRSGMVELLKNVDLEYLLDRYPPEKEVNWGEELSLGEQQRLGMARLFYHKPKF
AILDECTSAVTTDMEERFCSKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWRVHYKR
AEAPSLTDSEFNKNQHNETDRQSDAMTVQRAFATAKKGTKFSKSEAELYFSELISASPSE
ADEPPLHVFPHLKSVPRKLPLRIAAMSKVLVPRLLDKQGAQFLAVALLVVSRTWVSDRIA
SLNGTTVKFVLEQDKAAFLRLIFISVLQSAASSFIAPSLRHLTQTLALGWRIRLTKHLLK
NYLRNNAYYKVFNMSGVNLDADQRLTQDLEKLTTDLSSLVTGMVKPTVDILWFTWRMKLL
TGQRGVAILYAYMLLGLGFLRCVTPDFGDLASREQQLEGTFRFMHERLRTHAESVAFFGG
GAREKEMVEARFKELLHHSSLLLKKKWLFGIIDEFITKQLPHNVTWGLSLLYAMEHKGDR
ALTSTQGELAHALRFLASVVSQSFLAFGDILELHKKFVELSGGINRIFELEEFLDAAQYD
VPEGVSSSPSSEDVISFSEVDIITPGQKILARKLTCDIVKGKSLLVTGPNGSGKSSIFRV
LRGLWPVVSGKLVKPCQPLNTELGSGIFYVPQRPYTCLGTLRDQIIYPLSHEVAEKRVQA
MREGLRHLGSSNILDSHLQSILEDVKLVYLLEREGGWGANQNWEDILSLGEQQRLGMARL
FFHKPQFGILDECTNATSVDVEEHLYRLAKDAGITVVTSSQRPALIPFHSVELRLIDGEG
KWQLRSIKMDEEGEGEPNEYTQQL
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttcagcttctgcagttgactgaacatgggcgaggcctcttggcttctaaa
aggaaagctctgctgcttacgacaggtataattgttgctggtggaacagctgctgcgtac
atgcagtcacggagaacctataaggggcatgattctacacagtgcgatggagtgaatgat
ggtataatagagccaaataagcagaccagaaagggtaatagtgtgaagaaaagcaggcaa
aagaaaggaggtttgaagtctgtaaaagttttagcagctattcttctatctcgaatgggc
agaatgggtacgagagatctgttggctctggtagccacagtggtgttacgaactgctgta
agcaaccgattggcaaaagtgcaggggtttctttttcgtgctgccttcctccggcgtgtg
ccaatgtttttccgcctcatacttgaaaatattttgttgtgtttcctccagtcagccttg
cactcgacctctaaatatataactgggaccttgagtttacgcttccggagtattttaaca
aggcttattcatgcacaatattttcaggatatggtgtactataaactgtcccatgttgac
ggccggataacaaatccagaacagagaattgcaagtgatgttcccaggttctctagagag
ctaagtgatcttgtacaagaggatctcatagctgtcactgatgggcttctatatacttgg
cgcctgtgttcatatgcaagtccgaagtatcttttctggattttggcatatgttctgggt
gcagggcttactattagaaatttctcacctccatttgggaaactaatttcaaaagaacag
caactggaaggggaatacagacagcttcactcacgattaaggacccatgcagaaagcata
gcattttatggtggtgaaaccagagaagattttcacattcaacagaagtttaagactcta
gttcggcatatgaaggccgttcttcatgagcactggtggtttgggatgattcaagatttc
ttgcacaagtatcttggtgctacagttgctgttgtgttgattattgagcccttcttctct
ggcaatttgagacctgatgcatccacattgggacgagcagagatgttgagtaacttgaga
tatcacaccagtgtcataatatccttattccaggcattgggaacccttgcgataagttca
agacgactcaatcgtctaagtgggtatgcagatcgtattcatgagctcatgattatttct
agagatttaggtggacgtaatgcctcttccatacaatctaacgggagtagtaattatgtc
actgaggcaaattacattgagttcgatggggttaaggttgttactccaactggtaatgtg
ttggtagaggacttgagcctaagggttgaatcagggtctaatcttttgataacaggtcca
aatggcagcggcaaaagctcactttttcgagtccttggaggtctttggccacttgtttct
ggccatattgtaaaacctggaataggttctgatctgaataaggagatcttttatgtgccc
caacgtccatatacagctattggaacactacgtgaccagattatatatcctttaactgct
gatcaagaggttgaaccgctcacacgaagtggcatggttgaacttcttaaaaatgttgat
cttgagtatcttctggatcgctatcctcctgaaaaggaggtaaactggggtgaagaatta
tctctgggagagcagcaaagactggggatggctagacttttctaccataaaccaaaattt
gccattctggatgaatgtacaagtgctgtgacaactgatatggaggaacgcttttgttca
aaagtaagagcgatgggaacatcatgtatcactatttctcaccgccctgcgttggttgca
tttcatgatgtcgtcttgtccttggatggtgaaggaggctggagggttcactataagagg
gcagaggctcccagtctcacagactcagagttcaataagaaccagcataatgagaccgat
cgtcaaagtgatgcaatgactgtgcagcgtgcatttgctactgcaaaaaagggcacaaaa
ttctccaagtcagaggctgaattgtatttttcagagttgatatcagcatctccatctgaa
gctgatgagccccccttgcatgtcttcccacatcttaagagtgttccaaggaaacttcca
ctgagaattgctgccatgtctaaagttctggtacccagactgctagataagcagggggca
cagttccttgcagtcgctttacttgtggtgtccagaacgtgggtttccgatcgcattgcc
tctttaaatggaacaactgtgaaatttgtcctggagcaagataaggcggcattcctacgt
ttgatttttattagtgtccttcagagtgctgcgtcctcctttattgctccgtctctgagg
cacttgacgcagacattggcacttggatggaggattcgtttgaccaagcacttgttgaag
aactacttgagaaataatgcatattataaggtatttaacatgtcgggtgtcaacttggat
gctgatcagagattaactcaagatctggagaagctaaccactgacttgtctagtctggta
actggaatggtgaagccaactgttgacattctatggttcacatggagaatgaaactgcta
actggccagaggggagtcgctatattatatgcttacatgttattaggtttgggtttcctg
agatgtgttactcctgactttggtgacctggcaagtcgagaacaacagcttgaaggaact
ttcaggttcatgcatgaaaggttgcgaacacatgctgaatctgttgctttctttggaggt
ggtgctcgtgaaaaagagatggttgaagcaaggtttaaagaacttcttcaccactcttct
ttgcttcttaagaagaaatggttatttggcataatagatgagttcatcacgaagcagctt
cctcacaatgttacttggggattgagcctgttgtatgctatggagcacaagggcgaccgg
gctttgacttcaactcaaggtgaactcgctcatgcactgcgatttttagcatctgttgtg
tctcaaagctttttagcttttggtgacattcttgagctccacaaaaaatttgttgagctt
tctggtggtatcaatagaatttttgagctggaagagtttctagatgctgctcaatatgat
gtacctgaaggtgttagttcatcgccatcctctgaggatgtaatttctttctctgaagtg
gacatcatcacaccaggacaaaaaatcttggctaggaagctaacatgtgatatagtgaag
gggaaaagccttcttgtaactggccctaatggaagtggaaagagttcaatcttcagagtc
cttcgtggtttatggccagttgtaagtggaaaattagttaaaccatgccaaccgcttaac
acagaattaggcagtggcatcttctatgtaccccaacgaccatatacgtgcttaggaact
ttaagggatcaaattatatatcctctctcacatgaagtggctgagaaaagggtacaggct
atgcgagaaggtctgagacatctagggtcttctaacattttggattctcatctgcaatca
attctcgaggatgttaaattagtctaccttttagaaagagaaggtggctggggtgccaac
cagaactgggaggacatcctatctcttggagaacaacaacgattaggaatggcacgctta
ttttttcacaagccacagtttggaatccttgacgaatgtacaaatgctactagtgttgat
gttgaagaacacctttataggcttgctaaggatgctggcattaccgttgttacatcttca
cagcgccctgctctaatacctttccattctgtggaattacggttgattgatggtgaaggc
aagtggcagctgcgttcaattaagatggatgaggagggggaaggtgaaccaaatgaatat
acacaacaattgtga
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